ggKbase home page

PLM1_100_b1_sep16_scaffold_12_10

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(8419..8931)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Longispora albida RepID=UPI00036D79BF similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 168.0
  • Bit_score: 171
  • Evalue 4.10e-40
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 171.0
  • Bit_score: 162
  • Evalue 5.40e-38
Regulatory protein LuxR {ECO:0000313|EMBL:ADD43382.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 171.0
  • Bit_score: 162
  • Evalue 2.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stackebrandtia nassauensis → Stackebrandtia → Glycomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGACGCCCTGCTACGTACTCACGTCGATCAGCCAGTCCGCCGCGCTGGCCCGACGCCTCGGCCGCGACGGCTGGGACGTCCACGAAGGGTTCGCCCTGCCCGACGAGCCGTGGGACGTGTCCCGCAACCGCATGCTGCTGGTTGGCCTTGTCGACGACGCCACGGCGGCGGCCGACGCGGTGCTCGCCGCAGCTCGTGGCGCCGCCGTGATCGCCACCGTCGAGGACGGCTCCGAGGTGGCGGTCCTGCTCGTCGCCGACCTGAGCCGCATCGGCCCGGTCACCCGTACCGCCGAACCCGAGCCCGACACCGGTGGTTTCGCGGCGCTCACCGCCGAGCAGTGCGCGCTGCTGGAGCGGCTCGCCACTGGCGACTCCATCGCCGCCGCTGCCGACGCCGAGTTTCTCTCCCTGCGCACCGCCAACCGCCGGATCGCCCAGGCCCGCGCGATCCTCGGCGTACGGACGACCCGTCAGGCCGTCGTGGAGTATGTGCGGTTGCGGCGCGGGTAG
PROTEIN sequence
Length: 171
MTPCYVLTSISQSAALARRLGRDGWDVHEGFALPDEPWDVSRNRMLLVGLVDDATAAADAVLAAARGAAVIATVEDGSEVAVLLVADLSRIGPVTRTAEPEPDTGGFAALTAEQCALLERLATGDSIAAAADAEFLSLRTANRRIAQARAILGVRTTRQAVVEYVRLRRG*