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PLM1_100_b1_sep16_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_12_1
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(285..1511)
DNA (1227bp) protein (409aa)
Major facilitator superfamily MFS_1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CFE8_STRBB
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADI04684.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_100_b1_sep16_scaffold_12_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1588..1998)
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4V9_FRADG
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEH10082.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_12_3
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2004..2453)
DNA (450bp) protein (150aa)
Transcriptional regulator, AraC family Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4V8_FRADG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEH10081.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_12_4
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2654..3652
DNA (999bp) protein (333aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QSM8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK24926.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_100_b1_sep16_scaffold_12_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3856..4755
DNA (900bp) protein (300aa)
Oxidoreductase domain-containing protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AZQ7_STRRD
Oxidoreductase {ECO:0000313|EMBL:ETK35957.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
oxidoreductase domain-containing protein
PLM1_100_b1_sep16_scaffold_12_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4826..5536
DNA (711bp) protein (237aa)
Metal-dependent phosphohydrolase HD region Tax=Micromonospora RepID=D9SY36_MICAI
metal dependent phosphohydrolase
Metal-dependent phosphohydrolase HD region {ECO:0000313|EMBL:ADL47080.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_12_7
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5533..6309)
DNA (777bp) protein (259aa)
Trans-aconitate 2-methyltransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RGQ6_9ACTO
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:EEP74478.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
trans-aconitate 2-methyltransferase
PLM1_100_b1_sep16_scaffold_12_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6440..7441
DNA (1002bp) protein (334aa)
D-3-phosphoglycerate dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAL7_STRRD
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ETK32111.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
D-3-phosphoglycerate dehydrogenase
PLM1_100_b1_sep16_scaffold_12_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7604..8458
DNA (855bp) protein (285aa)
Phospholipid/glycerol acyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4G4_9ACTO
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCH18711.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
phospholipid/glycerol acyltransferase
PLM1_100_b1_sep16_scaffold_12_10
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8419..8931)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036D79BF
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ADD43382.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_12_11
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8928..9473)
DNA (546bp) protein (182aa)
LuxR family transcriptional regulator Tax=Actinoplanes sp. N902-109 RepID=R4LGG5_9ACTO
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AGL17488.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_100_b1_sep16_scaffold_12_12
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9600..10382
DNA (783bp) protein (261aa)
Glycerophosphoryl diester phosphodiesterase Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JWU0_STRRC
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KIE40441.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
glycerophosphoryl diester phosphodiesterase
PLM1_100_b1_sep16_scaffold_12_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10406..11767
DNA (1362bp) protein (454aa)
MFS transporter Tax=Micromonospora sp. CNB394 RepID=UPI00035FD870
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61953.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_12_14
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11805..11966
DNA (162bp) protein (54aa)
Thymidine kinase {ECO:0000313|EMBL:CCH31587.1}; EC=2.7.1.21 {ECO:0000313|EMBL:CCH31587.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
thymidine kinase Tax=Longispora albida RepID=UPI0003742F47
tdk; thymidine kinase
PLM1_100_b1_sep16_scaffold_12_15
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11963..12634)
DNA (672bp) protein (224aa)
Methyltransferase type 12 Tax=Saccharopolyspora erythraea RepID=A4FAC0_SACEN
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:CAM00995.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_100_b1_sep16_scaffold_12_16
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12707..13099)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ribonuclease Tax=Micromonospora sp. CNB394 RepID=UPI0003632E85
hypothetical protein
PLM1_100_b1_sep16_scaffold_12_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13420..14040)
DNA (621bp) protein (207aa)
Putative uncharacterized protein Tax=Comamonas testosteroni ATCC 11996 RepID=H1RN61_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN66211.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_12_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14218..15966
DNA (1749bp) protein (583aa)
Acyl-CoA dehydrogenase (Modular protein) Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4F2_9ACTO
Acyl-CoA dehydrogenase (Modular protein) {ECO:0000313|EMBL:CCH18699.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
acyl-CoA dehydrogenase domain-containing protein
PLM1_100_b1_sep16_scaffold_12_19
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15988..16395)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3CX22_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC84775.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM1_100_b1_sep16_scaffold_12_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16514..16858
DNA (345bp) protein (115aa)
RNA polymerase-binding protein RbpA Tax=Micromonosporaceae RepID=D9TCG4_MICAI
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_12_21
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16983..17519)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003757282
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:CCH70337.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
PLM1_100_b1_sep16_scaffold_12_22
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17528..18316)
DNA (789bp) protein (263aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037ADF96
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:AJE39679.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
PLM1_100_b1_sep16_scaffold_12_23
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18313..20331)
DNA (2019bp) protein (673aa)
Apolipoprotein N-acyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L445_9ACTO
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CCH18592.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
apolipoprotein N-acyltransferase
PLM1_100_b1_sep16_scaffold_12_24
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20950..22344)
DNA (1395bp) protein (465aa)
glutamate mutase Tax=Micromonospora sp. CNB394 RepID=UPI0003788727
Uncharacterized protein {ECO:0000313|EMBL:EWM63741.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_12_25
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22341..22724)
DNA (384bp) protein (128aa)
Thioesterase superfamily protein Tax=Micromonospora RepID=D9TCF5_MICAI
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADL46653.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_12_26
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22721..23470)
DNA (750bp) protein (250aa)
Cobalamin B12-binding domain protein Tax=Micromonospora sp. (strain L5) RepID=E8S9E9_MICSL
cobalamin B12-binding domain-containing protein
D-lysine 5,6-aminomutase, beta subunit {ECO:0000313|EMBL:EWM63743.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_100_b1_sep16_scaffold_12_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23467..25035)
DNA (1569bp) protein (523aa)
D-Lysine 56-aminomutase alpha subunit Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TCF3_MICAI
D-Lysine 56-aminomutase subunit alpha
D-Lysine 56-aminomutase alpha subunit {ECO:0000313|EMBL:ADL46651.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_12_28
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25088..26695)
DNA (1608bp) protein (536aa)
amidohydrolase Tax=Streptomyces sp. CcalMP-8W RepID=UPI0003723D51
Amidohydrolase {ECO:0000313|EMBL:KJY32364.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
Amidohydrolase 3
PLM1_100_b1_sep16_scaffold_12_29
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26719..27762)
DNA (1044bp) protein (348aa)
L-erythro-3,5-diaminohexanoate dehydrogenase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PMV9_KRIFD
L-erythro-3,5-diaminohexanoate dehydrogenase
L-erythro-3,5-diaminohexanoate dehydrogenase {ECO:0000313|EMBL:ADB32661.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_12_30
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27873..29288
DNA (1416bp) protein (472aa)
lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine 2,3-aminomutase Tax=Saccharomonospora glauca K62 RepID=I1D2Q9_9PSEU
Lysine 2,3-aminomutase {ECO:0000313|EMBL:EIE99233.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
Displaying items 1-30 of 94 in total

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