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PLM1_100_coex_sep16_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_43_1
unknown

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_43_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(146..1900)
DNA (1755bp) protein (585aa)
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_43_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1989..2387)
DNA (399bp) protein (133aa)
Histidine kinase (EC:2.7.13.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator receiver modulated metal dependent phosphohydrolase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_43_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2541..3275)
DNA (735bp) protein (245aa)
id=14625986 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_43_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3809..4333
DNA (525bp) protein (175aa)
CBS domain containing protein bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_43_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4330..4563)
DNA (234bp) protein (78aa)
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_43_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4653..5042)
DNA (390bp) protein (130aa)
PAS/PAC sensor hybrid histidine kinase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSP3_9ACTO
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AGZ39832.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_coex_sep16_scaffold_43_8
unknown

Not on your lists

5209..5535
DNA (327bp) protein (109aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_43_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5538..6320)
DNA (783bp) protein (261aa)
id=4430353 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_43_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6566..7591
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mreB-1; rod shape-determining protein MreB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_43_11
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(7864..9390)
DNA (1527bp) protein (509aa)
Oligopeptide ABC transporter substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=RBG_16_NC10_65_8_curated
PLM1_100_coex_sep16_scaffold_43_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9518..10807
DNA (1290bp) protein (430aa)
1,3-propanediol dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iron-containing alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_43_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10955..12331)
DNA (1377bp) protein (459aa)
Putative oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_43_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12479..12790
DNA (312bp) protein (104aa)
id=4426892 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_43_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12809..15115)
DNA (2307bp) protein (769aa)
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
Penicillin-binding protein, 1A family bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_43_16
unknown

Not on your lists

comp(15153..15536)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_43_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15545..16171)
DNA (627bp) protein (209aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_43_18
unknown

Not on your lists

comp(16175..16531)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_43_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16713..17327)
DNA (615bp) protein (205aa)
Response regulator receiver bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Response regulator with antiterminator output domain
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_43_20
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

17528..18349
DNA (822bp) protein (274aa)
Uncharacterized protein (Fragment) Tax=Emiliania huxleyi CCMP1516 RepID=R1DBS1_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD32352.1, ECO:0000313|EnsemblProtists:EOD32352}; Flags: Fragment;; species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_43_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(18360..19730)
DNA (1371bp) protein (457aa)
response regulator in two-component regulatory system, sigma 54-dependent bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator in two-component regulatory system, sigma 54-dependent
Tax=CSP1_5_NC10
PLM1_100_coex_sep16_scaffold_43_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19953..20402)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C235_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38302.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_coex_sep16_scaffold_43_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20427..20915)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63097.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_43_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21222..21926
DNA (705bp) protein (235aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_43_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

21931..24981
DNA (3051bp) protein (1017aa)
maltooligosyl trehalose synthase (EC:5.4.99.15)
Maltooligosyl trehalose synthase bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_43_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24978..26822
DNA (1845bp) protein (615aa)
Malto-oligosyltrehalose trehalohydrolase bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
malto-oligosyltrehalose trehalohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_43_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26921..28135)
DNA (1215bp) protein (405aa)
Glycogen synthase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative mannosyl transferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_43_28
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

28165..28827
DNA (663bp) protein (221aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_43_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

28827..30029
DNA (1203bp) protein (401aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_43_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

30029..31264
DNA (1236bp) protein (412aa)
Glycosyl transferase, family 2 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 1-30 of 41 in total

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