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PLM1_100_coex_sep16_scaffold_162

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_162_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..1017
DNA (1017bp) protein (339aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1023..2237
DNA (1215bp) protein (405aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


2367..3146
DNA (780bp) protein (260aa)
30S ribosomal protein S2 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsB; 30S ribosomal protein S2
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3161..3763
DNA (603bp) protein (201aa)
Elongation factor Ts bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
translation elongation factor Ts
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3771..4520
DNA (750bp) protein (250aa)
Uridylate kinase bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyrH; uridylate kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4524..5084
DNA (561bp) protein (187aa)
Ribosome-recycling factor bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
frr; ribosome recycling factor
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5328..6110
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6110..6979
DNA (870bp) protein (290aa)
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41)
Phosphatidate cytidylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6976..8151
DNA (1176bp) protein (392aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8159..9520
DNA (1362bp) protein (454aa)
rseP; regulator of sigma E protease (EC:3.4.24.-)
Membrane-associated zinc metalloprotease bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9520..9843
DNA (324bp) protein (108aa)
Ferredoxin bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ferredoxin
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


9852..11567
DNA (1716bp) protein (572aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11675..12160
DNA (486bp) protein (162aa)
Ribosome maturation factor RimP bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12157..13530
DNA (1374bp) protein (458aa)
NusA antitermination factor bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor)
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13575..13802
DNA (228bp) protein (76aa)
hypothetical protein; K07742 hypothetical protein bin=bin7_NC10_sister species=Selenomonas sp. oral taxon 138 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_162_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13808..16345
DNA (2538bp) protein (846aa)
Translation initiation factor IF-2 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
infB; translation initiation factor IF-2
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16367..16657
DNA (291bp) protein (97aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16731..17099
DNA (369bp) protein (123aa)
Ribosome-binding factor A bin=GWC2_Methylomirabilis_70_16 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribosome-binding factor A
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17099..18115
DNA (1017bp) protein (339aa)
Exopolyphosphatase-like enzyme bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphoesterase RecJ domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_162_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18112..19029
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
truB; tRNA pseudouridine synthase B
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18992..19927
DNA (936bp) protein (312aa)
Riboflavin kinase / FMN adenylyltransferase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
riboflavin biosynthesis protein RibF
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


20073..20342
DNA (270bp) protein (90aa)
30S ribosomal protein S15 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpsO; 30S ribosomal protein S15
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_162_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20450..21157
DNA (708bp) protein (236aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 23 items

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