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PLM1_100_coex_sep16_scaffold_203

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_203_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1..543
DNA (543bp) protein (181aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_203_2
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

668..3013
DNA (2346bp) protein (782aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ADU51591.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADU51591.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD9_THEM7
PLM1_100_coex_sep16_scaffold_203_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3131..3943
DNA (813bp) protein (271aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774BBE
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KGM31215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
phytanoyl-coA dioxygenase
PLM1_100_coex_sep16_scaffold_203_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3955..4530)
DNA (576bp) protein (192aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_203_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4630..5586)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00035D0251
cyclase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM1_100_coex_sep16_scaffold_203_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5928..7601
DNA (1674bp) protein (558aa)
PAS domain S-box Tax=Microcoleus sp. PCC 7113 RepID=K9WLC4_9CYAN
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFZ20559.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM1_100_coex_sep16_scaffold_203_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7711..8157
DNA (447bp) protein (149aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_203_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8166..9035
DNA (870bp) protein (290aa)
Short chain dehydrogenase Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y8P7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETX03961.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
short-chain dehydrogenase/reductase SDR
PLM1_100_coex_sep16_scaffold_203_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9078..10145)
DNA (1068bp) protein (356aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00825.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
N5,N10-methylenetetrahydromethanopterin reductase protein bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
N5,N10-methylene tetrahydromethanopterin reductase
PLM1_100_coex_sep16_scaffold_203_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(10171..10824)
DNA (654bp) protein (218aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_203_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11236..11691)
DNA (456bp) protein (152aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_203_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11832..13067
DNA (1236bp) protein (412aa)
SMP-30/Gluconolaconase/LRE domain protein Tax=Variovorax paradoxus (strain S110) RepID=C5CZX1_VARPS
SMP-30/Gluconolaconase/LRE domain protein
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ACS22042.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM1_100_coex_sep16_scaffold_203_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13165..14184
DNA (1020bp) protein (340aa)
Luciferase-like monooxygenase bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_203_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14187..15269
DNA (1083bp) protein (361aa)
mdh2; malate dehydrogenase (EC:1.1.1.37)
Malate/L-lactate dehydrogenase Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEA8_9BURK
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_203_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15393..16364)
DNA (972bp) protein (324aa)
DNA polymerase III, subunit gamma/tau bin=GWA2_Methylomirabilis_73_35 species=Chlamydomonas reinhardtii genus=Chlamydomonas taxon_order=Chlamydomonadales taxon_class=Chlorophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_203_16

Not on your lists

comp(16813..17742)
DNA (930bp) protein (310aa)
Lipolytic enzyme Tax=uncultured bacterium RepID=B8Y564_9BACT
Lipolytic enzyme {ECO:0000313|EMBL:ACL67848.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipase/esterase
PLM1_100_coex_sep16_scaffold_203_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17805..19007)
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI000361EFBE
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM1_100_coex_sep16_scaffold_203_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19254..20120)
DNA (867bp) protein (289aa)
Putative oxidoreductase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2R1_CALAS
putative oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_203_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20194..22518)
DNA (2325bp) protein (775aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_203_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22541..23044)
DNA (504bp) protein (168aa)
Cupin region Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_203_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23207..24052
DNA (846bp) protein (282aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Pyrobaculum oguniense genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protocatechuate 4,5-dioxygenase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_203_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24049..24264
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQ83_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31302.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
PLM1_100_coex_sep16_scaffold_203_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24274..25122
DNA (849bp) protein (283aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_203_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25119..26489
DNA (1371bp) protein (457aa)
S-adenosylhomocysteine deaminase bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_203_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26479..27204)
DNA (726bp) protein (242aa)
Sporulation domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP3_ANADF
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABS26489.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_coex_sep16_scaffold_203_26
unknown

Not on your lists

27455..27562
DNA (108bp) protein (36aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_203_27
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27566..28402
DNA (837bp) protein (279aa)
fabG2; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=Ralstonia sp. GA3-3 RepID=R7XN66_9RALS
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EON20490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM1_100_coex_sep16_scaffold_203_28
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28502..28948)
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Ribonuclease H Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5L6_DESAP
ribonuclease H
PLM1_100_coex_sep16_scaffold_203_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(29046..29753)
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_203_trna_2
unknown

Not on your lists

comp(29878..29950)
DNA (73bp)
transferRNA Met
Displaying items 1-30 of 44 in total

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