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PLM1_100_coex_sep16_scaffold_283

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_283_1
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

1..1101
DNA (1101bp) protein (367aa)
Aminotransferase bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
class III aminotransferase
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_100_coex_sep16_scaffold_283_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(1164..1700)
DNA (537bp) protein (179aa)
ribosomal protein L11 methylase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
ribosomal protein L11 methylase
Tax=CSP1_5_NC10
PLM1_100_coex_sep16_scaffold_283_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

1756..2970
DNA (1215bp) protein (405aa)
radical SAM domain-containing protein bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Radical SAM domain protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_283_4
unknown

Not on your lists

3030..3392
DNA (363bp) protein (121aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_283_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

3428..3835
DNA (408bp) protein (136aa)
Putative thiol-disulphide oxidoreductase DCC bin=GWA2_Elusimicrobia_69_24 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
thiol-disulfide oxidoreductase dcc
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_100_coex_sep16_scaffold_283_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

3828..4607
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_100_coex_sep16_scaffold_283_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4617..5600)
DNA (984bp) protein (328aa)
Ornithine cyclodeaminase Tax=alpha proteobacterium BAL199 RepID=A8TJK8_9PROT
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:AHG88911.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM1_100_coex_sep16_scaffold_283_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5597..6748)
DNA (1152bp) protein (384aa)
Membrane protein, major facilitator superfamily bin=GWC2_Methylomirabilis_70_24 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6745..7131)
DNA (387bp) protein (129aa)
ChrB protein bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7128..7544)
DNA (417bp) protein (139aa)
protein tyrosine phosphatase bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
protein tyrosine phosphatase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_283_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7541..8710)
DNA (1170bp) protein (390aa)
chrA; Chromate transport protein ChrA bin=bin7_NC10_sister species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
chrA2; chromate transport protein ChrA
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_283_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8707..9633)
DNA (927bp) protein (309aa)
Chromate resistance exported protein bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ChrB protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_283_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9747..10025
DNA (279bp) protein (93aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_283_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10006..10464)
DNA (459bp) protein (153aa)
Membrane protein, major facilitator superfamily bin=GWC2_Methylomirabilis_70_24 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_283_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10461..11366)
DNA (906bp) protein (302aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent epimerase/dehydratase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11443..13800
DNA (2358bp) protein (786aa)
Uncharacterized conserved protein UCP016719 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13817..14776)
DNA (960bp) protein (320aa)
Putative xylanase/chitin deacetylase bin=GWC2_Methylomirabilis_70_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative xylanase/chitin deacetylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_283_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14779..15711)
DNA (933bp) protein (311aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GTP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15654..16244)
DNA (591bp) protein (197aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TonB-dependent receptor
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_283_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16465..17331
DNA (867bp) protein (289aa)
Alpha/beta hydrolase fold protein bin=GWC2_Methylomirabilis_70_16 species=Caulobacter vibrioides genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha/beta hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17353..20037)
DNA (2685bp) protein (895aa)
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit (FdhA2) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_22
unknown

Not on your lists

20058..20324
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_283_23
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20432..20977)
DNA (546bp) protein (182aa)
hypothetical protein Tax=Pannonibacter phragmitetus RepID=UPI000374BA6F
GNAT family acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:KEO53791.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
PLM1_100_coex_sep16_scaffold_283_24
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(21006..21278)
DNA (273bp) protein (91aa)
DNA binding domain, excisionase family protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI9_THERP
excisionase family DNA binding protein
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:ACM04526.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM1_100_coex_sep16_scaffold_283_25
unknown

Not on your lists

comp(21810..22073)
DNA (264bp) protein (88aa)
id=3024543 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PLM1_100_coex_sep16_scaffold_283_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22448..24514)
DNA (2067bp) protein (689aa)
dehydrogenase (EC:1.6.99.5)
Putative dehydrogenase, similar to gamma (5') and beta (3') subunits of formate dehydrogenase and to nuoE and nuoF of NADH dehydrogenase (FdhB2/C2) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(24531..25223)
DNA (693bp) protein (231aa)
queC; Queuosine biosynthesis protein queC (EC:3.5.-.-)
7-cyano-7-deazaguanine synthase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(25223..25900)
DNA (678bp) protein (226aa)
7-carboxy-7-deazaguanine synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
radical SAM domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_283_29
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

26000..26275
DNA (276bp) protein (92aa)
id=3227803 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_283_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(26285..27001)
DNA (717bp) protein (239aa)
Putative ubiE/COQ5 methyltransferase family protein bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_008B14 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 38 in total

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