ggKbase home page

PLM1_100_coex_sep16_scaffold_317

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_317_1
unknown

Not on your lists

2..163
DNA (162bp) protein (54aa)
glycosyl transferase family protein
PLM1_100_coex_sep16_scaffold_317_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(498..1310)
DNA (813bp) protein (271aa)
cobaltochelatase (EC:6.6.1.2)
Cobaltochelatase, CobN subunit {ECO:0000313|EMBL:ABU56773.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABU56773.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Cobaltochelatase, CobN subunit Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NH26_ROSCS
PLM1_100_coex_sep16_scaffold_317_3
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1349..1942)
DNA (594bp) protein (198aa)
Nitrile hydratase, alpha subunit Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3T2_9BACI
Nitrile hydratase, alpha subunit {ECO:0000313|EMBL:EGL84005.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
nitrile hydratase subunit alpha
PLM1_100_coex_sep16_scaffold_317_4
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1948..2628)
DNA (681bp) protein (227aa)
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase beta subunit Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3T3_9BACI
Nitrile hydratase beta subunit {ECO:0000313|EMBL:EGL84006.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
PLM1_100_coex_sep16_scaffold_317_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2698..3294)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XV92_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37147.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM1_100_coex_sep16_scaffold_317_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3284..3808)
DNA (525bp) protein (175aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_317_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3910..5043)
DNA (1134bp) protein (378aa)
Amidohydrolase 2 protein bin=GWA2_Methylomirabilis_73_35 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_317_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5084..6436)
DNA (1353bp) protein (451aa)
Flavin-dependent dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oxidoreductase, FAD-binding
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_317_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6485..6919
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DSU1_9BURK
acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_317_10

Not on your lists

6916..7293
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGM5_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KKL16304.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_317_11
unknown

Not on your lists

7587..8291
DNA (705bp) protein (235aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_317_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8382..10277)
DNA (1896bp) protein (632aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003631A9F
acyl-CoA synthetase/AMP-acid ligase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_317_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10364..11152
DNA (789bp) protein (263aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_317_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11178..12560)
DNA (1383bp) protein (461aa)
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_317_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12557..13576)
DNA (1020bp) protein (340aa)
2-alkenal reductase (EC:1.3.1.74) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_317_16
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(13593..14585)
DNA (993bp) protein (331aa)
Putative oxidoreductase Tax=Sorangium cellulosum (strain So ce56) RepID=A9G727_SORC5
NADP-dependent aryl-alcohol dehydrogenase
Tax=BJP_IG2069_Chloroflexi_70_12
Displaying 16 items

View Taxonomy