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PLM1_100_coex_sep16_scaffold_343

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_343_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

449..841
DNA (393bp) protein (131aa)
Putative Fimbrial protein pilin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial protein pilin
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_343_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

946..1929
DNA (984bp) protein (328aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2091..2531
DNA (441bp) protein (147aa)
Putative Transcription factor IscR bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transcription factor IscR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2551..3777
DNA (1227bp) protein (409aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3826..4242
DNA (417bp) protein (139aa)
scaffold protein bin=GWC2_Methylomirabilis_70_16 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrogen fixation protein, NifU-like protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_coex_sep16_scaffold_343_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4264..4590
DNA (327bp) protein (109aa)
Iron-sulfur cluster assembly protein IscA bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
iron-sulfur cluster insertion protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_coex_sep16_scaffold_343_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4655..5251
DNA (597bp) protein (199aa)
Co-chaperone protein HscB (Hsc20) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hscB; co-chaperone protein HscB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5229..7055
DNA (1827bp) protein (609aa)
Chaperone protein HscA (Hsc66) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hscA; chaperone protein HscA
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_coex_sep16_scaffold_343_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7055..7378
DNA (324bp) protein (108aa)
2Fe-2S ferredoxin bin=GWC2_Methylomirabilis_70_24 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_343_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7468..7668
DNA (201bp) protein (67aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_coex_sep16_scaffold_343_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7670..7900)
DNA (231bp) protein (77aa)
id=4806443 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7900..8256)
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8258..8593)
DNA (336bp) protein (112aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8612..9766
DNA (1155bp) protein (385aa)
Cysteine desulfurase bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase NifS
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9782..10174
DNA (393bp) protein (131aa)
FeS cluster assembly scaffold protein NifU bin=GWC2_Methylomirabilis_70_24 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Iron-sulfur cluster assembly scaffold protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10167..10841
DNA (675bp) protein (225aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11046..12263
DNA (1218bp) protein (406aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12315..13070
DNA (756bp) protein (252aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_343_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13088..14068
DNA (981bp) protein (327aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14074..15414
DNA (1341bp) protein (447aa)
Acetyl-CoA carboxylase, biotin carboxylase bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Carbamoyl-phosphate synthase L chain ATP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15584..16381
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16408..17184
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_343_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17193..18344
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_343_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18426..18641
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin/lipoyl attachment domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18665..19168
DNA (504bp) protein (168aa)
DinB family protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_343_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19244..20080
DNA (837bp) protein (279aa)
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20163..21689)
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sigma 38, RpoS
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21961..22461)
DNA (501bp) protein (167aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_343_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22667..24103
DNA (1437bp) protein (479aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_343_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24111..26033
DNA (1923bp) protein (641aa)
UDP-glucose--undecaprenyl-phosphate glucosyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aspartate aminotransferase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying items 1-30 of 37 in total

View Taxonomy