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PLM1_100_coex_sep16_scaffold_427

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_427_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(62..700)
DNA (639bp) protein (213aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_427_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(708..1691)
DNA (984bp) protein (328aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_427_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1832..4501
DNA (2670bp) protein (890aa)
ankyrin repeat-containing protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ankyrin repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_427_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4476..5264)
DNA (789bp) protein (263aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_427_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5435..5935
DNA (501bp) protein (167aa)
Tfp pilus assembly protein PilF Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJX6_CHLTF
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM1_100_coex_sep16_scaffold_427_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5991..7166)
DNA (1176bp) protein (392aa)
Response regulator receiver modulated serine phosphatase bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Serine phosphatase RsbU regulator sigma subunit
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7163..11212)
DNA (4050bp) protein (1350aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11303..12127)
DNA (825bp) protein (275aa)
Methyltransferase type 11 bin=GWC2_Methylomirabilis_70_16 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type 11 methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12136..12954)
DNA (819bp) protein (273aa)
Cof family hydrolase bin=GWC2_Methylomirabilis_70_16 species=Planococcus antarcticus genus=Planococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Cof-like hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12951..13199)
DNA (249bp) protein (83aa)
id=4307399 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13208..13444)
DNA (237bp) protein (79aa)
id=4307398 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13483..14040
DNA (558bp) protein (186aa)
NUDIX hydrolase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NUDIX hydrolase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_427_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14523..15476)
DNA (954bp) protein (318aa)
id=14627488 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_427_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15492..16229)
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_427_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16232..16543)
DNA (312bp) protein (104aa)
cupin bin=RBG_19FT_COMBO_GAL15_69_19 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_427_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16585..17559)
DNA (975bp) protein (325aa)
ABC transporter permease bin=GWF2_Methylomirabilis_70_14 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-aminoethylphosphonate ABC transport system, permease protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 16 items

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