ggKbase home page

PLM1_100_coex_sep16_scaffold_455

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_455_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1..1074
DNA (1074bp) protein (358aa)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_455_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1084..1977
DNA (894bp) protein (298aa)
Putative beta-lactamase bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. S23321 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_455_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1989..3104
DNA (1116bp) protein (372aa)
L-carnitine dehydratase/bile acid-inducible protein F bin=GWF2_Methylomirabilis_70_14 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_455_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3125..4168)
DNA (1044bp) protein (348aa)
putative 2-dehydropantoate 2-reductase bin=bin7_NC10_sister species=Bradyrhizobium sp. DFCI-1 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative 2-dehydropantoate 2-reductase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_455_5
unknown

Not on your lists

comp(4255..4362)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_455_6
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4560..8009
DNA (3450bp) protein (1150aa)
Multi-sensor hybrid histidine kinase Tax=Microcoleus vaginatus FGP-2 RepID=F5UFL3_9CYAN
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EGK88865.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
two-component hybrid sensor and regulator
PLM1_100_coex_sep16_scaffold_455_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8020..8838)
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WUD4_GEOS8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_455_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9041..9835
DNA (795bp) protein (265aa)
Putative phosphoesterase, ICC Tax=Microcoleus sp. PCC 7113 RepID=K9WD52_9CYAN
phosphoesterase, ICC
Putative phosphoesterase, ICC {ECO:0000313|EMBL:AFZ18335.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM1_100_coex_sep16_scaffold_455_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9832..10707
DNA (876bp) protein (292aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002FA4B1D
Uncharacterized protein {ECO:0000313|EMBL:KIF80109.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_455_10

Not on your lists

10717..11424
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN38383.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin3_NC10 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin3_NC10 organism_group=NC10
hypothetical protein
PLM1_100_coex_sep16_scaffold_455_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11483..12874
DNA (1392bp) protein (464aa)
Endonuclease/exonuclease/phosphatase bin=GWC2_Methylomirabilis_70_16 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_455_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12859..14775
DNA (1917bp) protein (639aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CAN96995.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAN96995.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Two-component hybrid sensor and regulator Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTU4_SORC5
Displaying 12 items

View Taxonomy