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PLM1_100_coex_sep16_scaffold_525

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_525_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..2191
DNA (2190bp) protein (730aa)
Dead/deah box helicase bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DEAD/DEAH box helicase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_525_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2205..3566
DNA (1362bp) protein (454aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_525_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(3541..4179)
DNA (639bp) protein (213aa)
Lysine exporter protein (LYSE/YGGA) Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B091_HERA2
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ABX05200.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM1_100_coex_sep16_scaffold_525_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4306..5328
DNA (1023bp) protein (341aa)
Extracellular solute-binding protein family 1 bin=GWF2_Methylomirabilis_70_14 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_525_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5336..6991
DNA (1656bp) protein (552aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_525_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7059..8087)
DNA (1029bp) protein (343aa)
Putative ABC transporter (ATP binding protein) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_525_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8090..9085)
DNA (996bp) protein (332aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein bin=GWC2_Methylomirabilis_70_16 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_525_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9243..9530
DNA (288bp) protein (96aa)
10 kDa chaperonin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_525_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9652..11100
DNA (1449bp) protein (483aa)
60 kDa chaperonin bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

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