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PLM1_100_coex_sep16_scaffold_616

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_616_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..498
DNA (498bp) protein (166aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI000382A53F
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_616_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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495..1583
DNA (1089bp) protein (363aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_616_3
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1568..2566
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, DctP subunit Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPA6_SYNFM
TRAP dicarboxylate transporter subunit DctP
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM1_100_coex_sep16_scaffold_616_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2576..3058
DNA (483bp) protein (161aa)
Tripartite ATP-independent periplasmic transporter, DctQ component Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPA5_SYNFM
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABK19257.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM1_100_coex_sep16_scaffold_616_5
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3065..4354
DNA (1290bp) protein (430aa)
TRAP dicarboxylate transporter, DctM subunit bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
TRAP dicarboxylate transporter subunit DctM
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM1_100_coex_sep16_scaffold_616_6
R_NC10_66_22, NC10, Bacteria

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4359..4772
DNA (414bp) protein (138aa)
translation initiation inhibitor
Putative translation initiation inhibitor bin=GWC2_Syntrophus__56_31 species=Pyrococcus sp. ST04 genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_616_7
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4804..5574
DNA (771bp) protein (257aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D6885
Uncharacterized protein {ECO:0000313|EMBL:KGF69776.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
fabG; 3-ketoacyl-ACP reductase
PLM1_100_coex_sep16_scaffold_616_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5582..5884
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11IB3_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG62862.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
PLM1_100_coex_sep16_scaffold_616_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5993..7513
DNA (1521bp) protein (507aa)
Transcriptional regulator, GntR family with aminotransferase domain protein bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_616_10
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7510..8391
DNA (882bp) protein (294aa)
ABC-type transporter, integral membrane subunit Tax=Desulfovibrio sp. X2 RepID=S7TYW6_9DELT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EPR41925.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
inner-membrane translocator
PLM1_100_coex_sep16_scaffold_616_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8442..9611
DNA (1170bp) protein (390aa)
Receptor family ligand binding region family protein 26 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HSR4_ACHXA
receptor family ligand binding region family protein 26
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM1_100_coex_sep16_scaffold_616_12
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9619..10257
DNA (639bp) protein (213aa)
Inner-membrane translocator Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M232_GEODF
inner-membrane translocator
Branched-chain amino acid ABC transporter, membrane protein {ECO:0000313|EMBL:ACM21150.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Displaying 12 items

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