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PLM1_100_coex_sep16_scaffold_618

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_618_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2..940
DNA (939bp) protein (313aa)
Amidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C792_SPHTD
amidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_618_2
unknown

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comp(963..1217)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_618_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1380..2261)
DNA (882bp) protein (294aa)
Ku family containing protein; K10979 DNA end-binding protein Ku bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Ku family containing protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_618_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2314..5076
DNA (2763bp) protein (921aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA ligase D
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_618_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5009..5710)
DNA (702bp) protein (234aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_618_6
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5707..6498)
DNA (792bp) protein (264aa)
rRNA methyltransferase Tax=Streptomyces vitaminophilus RepID=UPI0003801E32
rRNA methyltransferase {ECO:0000313|EMBL:KJY33459.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
tRNA/rRNA methyltransferase SpoU
PLM1_100_coex_sep16_scaffold_618_7
unknown

Not on your lists

6903..7280
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_618_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7840..8241)
DNA (402bp) protein (134aa)
id=4852965 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_618_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8428..8715
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
antibiotic biosynthesis monooxygenase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_618_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8719..8979)
DNA (261bp) protein (87aa)
Translation initiation factor 1 (EIF-1/SUI1) bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation factor Sui1
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_618_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9011..10177
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing enzyme Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120Q5_POLSJ
mandelate racemase/muconate lactonizing enzyme
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_618_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11001..12095)
DNA (1095bp) protein (365aa)
Alcohol dehydrogenase class III bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alcohol dehydrogenase class III
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_618_13
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12228..12581)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZNX3_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFE72254.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
PLM1_100_coex_sep16_scaffold_618_14
unknown

Not on your lists

12699..13670
DNA (972bp) protein (324aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_618_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13716..14255
DNA (540bp) protein (180aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_618_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14252..15220
DNA (969bp) protein (323aa)
Methylated-DNA--protein-cysteine methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_618_17
unknown

Not on your lists

15299..15487
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_618_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15484..15888
DNA (405bp) protein (135aa)
id=4554997 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_618_19
unknown

Not on your lists

15904..16119
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_618_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16159..17031
DNA (873bp) protein (291aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_618_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17062..17343
DNA (282bp) protein (94aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_618_22
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17388..18296
DNA (909bp) protein (303aa)
Sel1 domain protein repeat-containing protein Tax=alpha proteobacterium BAL199 RepID=A8TPT4_9PROT
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EDP64864.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_618_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18280..18690)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C922_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40315.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_coex_sep16_scaffold_618_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18690..19946)
DNA (1257bp) protein (419aa)
Putative TonB-dependent receptor Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT3_9BACT
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 24 items

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