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PLM1_100_coex_sep16_scaffold_753

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_753_1
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria

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3..1160
DNA (1158bp) protein (386aa)
Cytochrome c nitrite reductase catalytic subunit bin=GWA2_OP3_52_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Nitrite reductase
Tax=GWA2_OP3_52_12_curated
PLM1_100_coex_sep16_scaffold_753_2
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1171..1800
DNA (630bp) protein (210aa)
pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKL7_MARHT
PLM1_100_coex_sep16_scaffold_753_3
unknown

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comp(1938..2081)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_753_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(2078..3115)
DNA (1038bp) protein (346aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL58_BLASD
Tax=RBG_16_Chloroflexi_54_18_curated
PLM1_100_coex_sep16_scaffold_753_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3262..4431
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSV4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06246.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM1_100_coex_sep16_scaffold_753_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4470..7781
DNA (3312bp) protein (1104aa)
adenylate cyclase (EC:4.6.1.1)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM1_100_coex_sep16_scaffold_753_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7782..8153)
DNA (372bp) protein (124aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_753_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8176..8625)
DNA (450bp) protein (150aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS sensor protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_753_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(8600..8989)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7M8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43374.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM1_100_coex_sep16_scaffold_753_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(9079..9291)
DNA (213bp) protein (71aa)
Nuclease (SNase domain protein) bin=GWF2_Methylomirabilis_70_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_753_11
unknown

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comp(9291..9539)
DNA (249bp) protein (83aa)
id=3449075 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PLM1_100_coex_sep16_scaffold_753_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9550..10218)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037CD4AA
cyclase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_753_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10325..11017
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Sphingobium ummariense RL-3 RepID=T0KJ01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW96303.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ThiJ/PfpI family protein
PLM1_100_coex_sep16_scaffold_753_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11041..12642
DNA (1602bp) protein (534aa)
Peptidase S1 and S6 chymotrypsin/Hap bin=GWE1_T_denit_62_9 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 14 items

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