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PLM1_100_coex_sep16_scaffold_1070

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1070_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(17..331)
DNA (315bp) protein (105aa)
putative thiosulfate sulfurtransferase GlpE (EC:2.8.1.1)
Rhodanese domain protein bin=GWA2_Methylomirabilis_73_35 species=Kingella denitrificans genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_1070_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(478..1581)
DNA (1104bp) protein (368aa)
ABC-type spermidine/putrescine transport system, ATPase component bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1578..2747)
DNA (1170bp) protein (390aa)
Major facilitator superfamily transporter bin=GWC2_Methylomirabilis_70_16 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2750..4132)
DNA (1383bp) protein (461aa)
Binding-protein-dependent transport system inner membrane component family protein 55 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Ferric iron ABC transporter, permease protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4108..4326)
DNA (219bp) protein (73aa)
Binding-protein-dependent transport system inner membrane component family protein 55 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4326..5741)
DNA (1416bp) protein (472aa)
Putative transmembrane protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transmembrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5746..7251)
DNA (1506bp) protein (502aa)
Glycosyl transferase, group 1 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7248..7676)
DNA (429bp) protein (143aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8073..9425)
DNA (1353bp) protein (451aa)
Diguanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
diguanylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9433..9975)
DNA (543bp) protein (181aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10008..11492)
DNA (1485bp) protein (495aa)
TPR domain protein bin=GWC2_Methylomirabilis_70_16 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tetratricopeptide TPR_2
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11551..13773)
DNA (2223bp) protein (741aa)
Tetratricopeptide TPR_2 repeat protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR repeats containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1070_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13770..14699)
DNA (930bp) protein (310aa)
Polysaccharide deacetylase bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 13 items

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