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PLM1_100_coex_sep16_scaffold_1178

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1178_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(500..1759)
DNA (1260bp) protein (420aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 (EC:5.4.2.6)
HAD-superfamily hydrolase, subfamily IA, variant 3 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1866..2495)
DNA (630bp) protein (210aa)
UPF0637 protein HMPREF1013_00496 bin=GWC2_Methylomirabilis_70_24 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
yktB; hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2509..3993)
DNA (1485bp) protein (495aa)
Microcystin LR degradation protein MlrC-like protein bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
microcystin LR degradation protein MlrC-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4038..4397
DNA (360bp) protein (120aa)
Cupin domain-containing protein bin=GWF2_Methylomirabilis_70_14 species=SAR116 cluster alpha proteobacterium HIMB100 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4508..5425)
DNA (918bp) protein (306aa)
Binding-protein-dependent transport system inner membrane protein bin=GWC2_Methylomirabilis_70_16 species=Planococcus antarcticus genus=Planococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5422..6342)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport systems inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6449..7243)
DNA (795bp) protein (265aa)
Oligopeptide ABC transporter substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7234..7935)
DNA (702bp) protein (234aa)
Extracellular solute-binding protein family 5 bin=GWC2_Methylomirabilis_70_24 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oligopeptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8145..8726
DNA (582bp) protein (194aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyltransferase family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8776..9741
DNA (966bp) protein (322aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9738..11279
DNA (1542bp) protein (514aa)
ABC-type dipeptide transport system, periplasmic component bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter substrate binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1178_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11408..12352
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dipeptide/oligopeptide ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12459..13280
DNA (822bp) protein (274aa)
Dipeptide transport system permease protein dppC bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport systems inner membrane component
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1178_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13424..13831
DNA (408bp) protein (136aa)
stearoyl-CoA desaturase (delta-9 desaturase) (EC:1.14.19.1)
Putative fatty acid desaturase bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 15 items

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