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PLM1_100_coex_sep16_scaffold_1235

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1235_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2..622)
DNA (621bp) protein (207aa)
hypothetical protein bin=bin7_NC10_sister species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1235_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(840..1985)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase-like bin=GWA2_Methylomirabilis_73_35 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1235_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2197..3273)
DNA (1077bp) protein (359aa)
acyl-CoA dehydrogenase (EC:1.3.99.3)
Acyl-CoA dehydrogenase domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1235_4

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comp(3321..4355)
DNA (1035bp) protein (345aa)
Luciferase-like, subgroup Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD21_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKK95377.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FMN-dependent monooxygenase
PLM1_100_coex_sep16_scaffold_1235_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4355..4879)
DNA (525bp) protein (175aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1235_6
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4948..5658)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Nocardiopsis xinjiangensis RepID=UPI0003610E10
Hydrolase {ECO:0000313|EMBL:EXU92626.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hydrolase
PLM1_100_coex_sep16_scaffold_1235_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5765..6442)
DNA (678bp) protein (226aa)
Polar amino acid ABC transporter, inner membrane subunit bin=GWF2_Methylomirabilis_70_14 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polar amino acid ABC transporter inner membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1235_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6445..7167)
DNA (723bp) protein (241aa)
GltJ1 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltJ1; protein GltJ1
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1235_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7308..8171)
DNA (864bp) protein (288aa)
gltB1; protein GltB1 (EC:1.4.1.13)
Extracellular solute-binding protein, family 3 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1235_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8195..8941)
DNA (747bp) protein (249aa)
Phosphate-transporting ATPase bin=GWF2_Methylomirabilis_70_14 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Phosphate-transporting ATPase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1235_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8938..10752)
DNA (1815bp) protein (605aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14)
Acetyl CoA carboxylase, biotin carboxylase subunit bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1235_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10892..11929)
DNA (1038bp) protein (346aa)
ABC transporter, substrate-binding component bin=bin7_NC10_sister species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1235_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11945..12742)
DNA (798bp) protein (266aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein bin=bin7_NC10_sister species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport systems inner membrane component
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1235_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12742..13539)
DNA (798bp) protein (266aa)
ABC transporter related protein bin=GWA2_Methylomirabilis_73_35 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1235_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13541..13687)
DNA (147bp) protein (49aa)
benzoate-CoA ligase (EC:6.2.1.25)
benzoate-CoA ligase family bin=bin7_NC10_sister species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 15 items

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