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PLM1_100_coex_sep16_scaffold_1636

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1636_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
Hydroxymethylpyrimidine ABC transporter, substrate-binding component bin=GWC2_Methylomirabilis_70_24 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
substrate-binding region of ABC-type glycine betaine transport system
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1636_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(785..1957)
DNA (1173bp) protein (391aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1636_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2205..3308)
DNA (1104bp) protein (368aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1636_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3322..4551)
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1636_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4548..5870)
DNA (1323bp) protein (441aa)
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recombination factor protein RarA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1636_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5878..6627)
DNA (750bp) protein (250aa)
Transposase IS111A/IS1328/IS1533 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL07_DESK7
transposase IS111A/IS1328/IS1533
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:AEG15372.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM1_100_coex_sep16_scaffold_1636_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6624..6971)
DNA (348bp) protein (116aa)
Putative transposase y4uE Tax=Rhizobium sp. (strain NGR234) RepID=Y4UE_RHISN
transposase
Putative transposase y4uE; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
PLM1_100_coex_sep16_scaffold_1636_8
unknown

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comp(7193..7270)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 8 items

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