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PLM1_100_coex_sep16_scaffold_1723

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1723_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2..550
DNA (549bp) protein (183aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1723_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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547..1521
DNA (975bp) protein (325aa)
Putative ABC transporter permiase component bin=GWF2_Methylomirabilis_70_14 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter permiase component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1723_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1488..2240
DNA (753bp) protein (251aa)
LivG-like protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivG-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1723_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2237..3001
DNA (765bp) protein (255aa)
Probable high-affinity branched-chain amino acid transport ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braG; high-affinity branched-chain amino acid transport ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1723_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3015..3461)
DNA (447bp) protein (149aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1723_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3587..4048)
DNA (462bp) protein (154aa)
GAF sensor hybrid histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1723_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4216..4938)
DNA (723bp) protein (241aa)
Endonuclease/exonuclease/phosphatase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endonuclease/exonuclease/phosphatase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1723_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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5067..5720
DNA (654bp) protein (218aa)
Isovaleryl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
mmgC; acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 8 items

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