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PLM1_100_coex_sep16_scaffold_246_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 299..2929

Top 3 Functional Annotations

Value Algorithm Source
pre-mRNA-splicing ATP-dependent RNA helicase (EC:3.6.1.-) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 814.0
  • Bit_score: 1082
  • Evalue 0.0
Putative helicase (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 815.0
  • Bit_score: 869
  • Evalue 4.70e-250
Tax=CSP1_8_Deltaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 879.0
  • Bit_score: 1055
  • Evalue 0.0

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Taxonomy

CSP1_8_Deltaproteobacteria → 43F-1404R → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2631
GTGACGTCATCGTCAGCAGAGCTCCGGGAGGCGATCGCCCGCGAGGAAGCTCGGCTCGCGGGCCTGGAAGATGAGCGCCGACGGGCACAGAATCGGCTGGAAGGTCTCCGAAGCGACCTGGCGCTGGCCGCTCTGGAGGCCCCCGCCGCCGGCCGGCTGCTTCCCCTCCTCCCAGATCCGACCCGACCCGACACTACCAACGAGAAGGTGGCGCTCTTCCGTCAACTCTTCCGGGGCCGAGACGATGTCTACCCGCGGCTTTGGACCAACACCACCACCGGGCGCAAAGGATACGCTCCCGCGTGCGGGAACGAGTGGGTACGCGGCATCTGCGAGAAGCCTCGCGTCAAGTGTGGGGAGTGTCCCAACCAGGCGTTTATCCCCGTCACGGATCGGATCATTCTCGATCACCTCCAGGGGCGGCATGTCGTGGGTGTCTACCCACTCCTCACGGACGAGACCTGCTGGCTCCTGGCCGCCGACTTCGACAAGAGTTCCTGGGCGGACGACGTGTTGGCGTTCGCGGAGACTTGCCGGACGATTGGCGTGCCGACCGCCGTCGAGCGTTCCCGATCCGGCCAAGGCGCCCATGCCTGGTTCTTCTTCACCGCGCCCGTCGCTGCCAGTCTGGCGCGGAAGATGGCGTGCTTCCTGCTCACGGAGACGATGTCTCGCCATCATCAGCTCAGCATGGGATCCTACGACCGGCTCTTTCCCCATCAGGACACGCTGCCCCGGGGCGGCTTCGGGAATCTCATCGCACTCCCGCTCCAGCACGGCCCCCGACAGGCGGGCAACACGGTCTTCCTGGACGCACAGCTCGCCCCCTATCCCGATCAGTGGGCCTACCTTGCCTCCACCCCTCGGATCGAACCTGCCGTCGTTGAGCGCATCGCGCGGGACGCGACGCGGACCGGTCAGGTGCTGGGCGTGCGGTGGCCCGACGACGAGGGCGACGACGACCGGGTCCCCTGGAACCGCGCCCCGTCTCGACGGACCGCCACGGTCCGCCTGCCGGGGCCACTCCCCAGCAACGTCCGAGGTGTCCTGGCTCAGAAGCTCTTCATCGAGAAGGCGGGGCTGCTCTCGTCGCAGCTCAACCAGATCAAGCGACTGGGAGCTTTCCAGAATCCCGAGTTCTACAAGAAGCAGCAGCTCCGGCTCTCGACCGCGCTCACTCCGCGGGTGATCGCCTGTGCCGAAGAGCTCCCAGAATACGTTGCACTGCCCCGGGGGTGTCGCGGGGATCTCGAGGAACTCCTCGGGGCGGCAGGAAGCCGCATGGTCATCGAGGACCGGCGTCAGGAGGGCGGACGGCTTGACCTCGGGTTCCAGGGCGAGCTGACTCCCGTCCAGGAGCAGGCCGCGCGGGCGCTCTTGGCGCACGAGACCGGCGTCTTTGTGGCACCGCCGGGAGTTGGCAAGACGGTCGTGGGGGCCTACCTCGTGGCGGCCCGGGCCCGAAGCACGCTCGTCCTCGTCCATCGACAGCCTCTGCTCGACCAGTGGATCGCGCAGCTGTCGATGTTCCTCGGGTTGGACCCGAAGGCGATTGGGCAGATCGGGGCGGGCAAACGGACGCCAACGGGTCAGCTGGACGTGGCCATGCTACAGAGCCTCGTCCGGGAGGGACAGGTGGACGACGTCGTGGCGGGCTACGGCTACGTCATCGTCGATGAGTGCCACCACGTCCCGGCGGTGTCCTTCGAGCGGGTCCTCTCCGAGGTCAAGGCGCGCTTCATCACCGGCTTGACGGCCACGCCTCGCAGGCGGGACGGGCTCCACCCGATCCTCGACATGCAGCTTGGGCCCGTGCGCTACGCCGTGGATCCCAAGAGCCAGGCGGCCCGCCGGCCATTCGACCACCGGCTGGTGGTCCGCCAGACCGACTTCACCGGAAACGCTCTCGACCCAAACCAGGGCATTCAGGCTCTCTACGGCGCGCTGGCCGGAGACGAGCGACGGAATCGGCTGATCCTCGGCGACGTCGTCCACTCGATCGAGGAAGGCCGGTCGCCAATCCTCCTGACAGAGCGGAAGGACCATCTGGAGCATCTGGCCGCCCGGCTTCGGCCTCTCGTCCGCAATCTCCTCGTCCTGCAGGGCGGCATGACACCAAGGGCGCGCCGCGAGATCACGGCGCGCCTCGCGCGTATTCCAGATGACGAGCCGAGGCTCGTGCTTGCCACGGGACGGTACATCGGCGAAGGCTTCGACGACGCACGGCTCGACACCCTGTTCCTCACGATGCCCGTGTCCTGGAAGGGCACCCTGGTCCAGTACGCCGGTCGGCTCCACCGGCTCCACCCCGGCAAGGCGGAGGTGCGCATCTACGACTACGTCGATCGCGAGGTGCCACTCCTCCTGCGGATGTTCGAGAAGCGACTCCGAGGCTACCGCGCCATCGGCTATGCGCGCGATGCCGCGCCCTTCGCGTACGACGCGAAGTCTGACGGACAGACGCCCGATTTGCCGATCGACGAGACGCGGCGAGTCGGCGATCAGGTGAGGGGACGTGAGGGCAGTGCGACCGGCCCGGCCCGCCGCCGTCCTACCGGGAGAGCTTCCGGGCGCGGCGCAGCCGCACCATCGCGCCGACGAGCCTCGAAACGGCGGGCAACCCAGGACTGA
PROTEIN sequence
Length: 877
VTSSSAELREAIAREEARLAGLEDERRRAQNRLEGLRSDLALAALEAPAAGRLLPLLPDPTRPDTTNEKVALFRQLFRGRDDVYPRLWTNTTTGRKGYAPACGNEWVRGICEKPRVKCGECPNQAFIPVTDRIILDHLQGRHVVGVYPLLTDETCWLLAADFDKSSWADDVLAFAETCRTIGVPTAVERSRSGQGAHAWFFFTAPVAASLARKMACFLLTETMSRHHQLSMGSYDRLFPHQDTLPRGGFGNLIALPLQHGPRQAGNTVFLDAQLAPYPDQWAYLASTPRIEPAVVERIARDATRTGQVLGVRWPDDEGDDDRVPWNRAPSRRTATVRLPGPLPSNVRGVLAQKLFIEKAGLLSSQLNQIKRLGAFQNPEFYKKQQLRLSTALTPRVIACAEELPEYVALPRGCRGDLEELLGAAGSRMVIEDRRQEGGRLDLGFQGELTPVQEQAARALLAHETGVFVAPPGVGKTVVGAYLVAARARSTLVLVHRQPLLDQWIAQLSMFLGLDPKAIGQIGAGKRTPTGQLDVAMLQSLVREGQVDDVVAGYGYVIVDECHHVPAVSFERVLSEVKARFITGLTATPRRRDGLHPILDMQLGPVRYAVDPKSQAARRPFDHRLVVRQTDFTGNALDPNQGIQALYGALAGDERRNRLILGDVVHSIEEGRSPILLTERKDHLEHLAARLRPLVRNLLVLQGGMTPRARREITARLARIPDDEPRLVLATGRYIGEGFDDARLDTLFLTMPVSWKGTLVQYAGRLHRLHPGKAEVRIYDYVDREVPLLLRMFEKRLRGYRAIGYARDAAPFAYDAKSDGQTPDLPIDETRRVGDQVRGREGSATGPARRRPTGRASGRGAAAPSRRRASKRRATQD*