ggKbase home page

PLM1_100_coex_sep16_scaffold_258_15

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(15391..16587)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 400.0
  • Bit_score: 399
  • Evalue 3.70e-108
acyl-CoA transferase/carnitine dehydratase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 402.0
  • Bit_score: 382
  • Evalue 1.30e-103
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 400.0
  • Bit_score: 399
  • Evalue 5.20e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGCTGATCGGAATCCGCGGGGCCCGCTCGACGGCGTGAAGGTGCTCGACATGACCGAGCACATGGCCGGCCCCTTCTGCACCATGATCCTGGCCGACATGGGCGCCGACGTGATCAAGCTCGAGCGGCCCGGCGCGGGCGACTCCTCCCGCGGCATGGGCGACGGCAGCGAGCGCAATCCCTACTTCCGCTACATCAATCGCAACAAGAAGAGCCTGACGCTCGACTACAAGGGTGCGCGCGGCCGCGAGATCTTCCTCAAGCTCATCCCTTCCATGGACGTGCTCGTGGAGAACTACCGCCCCACCGTCATGGACCGCGCCGGGCTCGGCTGGGAGACCTTGAACCGGTTGAACCCACGGTTGATTTACGCCCAGCTCTCCGGCTTCGGCTCCGACGGCCCCTATCGCGAGAAGGGCGGCTTCGACCTGATCGCCCAGGGGATGGGCGGCATCATGCACGTCACCGGCGAGCCCGACGGCCCGCCCACCTCGGTGGGCCTGCCCATCTGCGATCTCGGCACCGGCATGTGGGGCGCCCAGGGCGTCCTGGCCGCGCTCTACGAGCGGCAGCGCACCGGCCGGGGCCAGAAGGTCGAGTGCTCGCTGCTGGAGACCGCGGTCGGCTTCTCCTCGTGGACCAGCGCGGGCTGGCTGGCCGACCACGTCGAGCCCGTCCGCATGGGCTCGCGCCACCGCCAGAACGCGCCCTACCAGCGCTTCGAGACCAAGGACGGCTACATGATGATCGGCGCCGGCGGCCAGTCCATCTGGCAGCGCTGCGCCCGCGCGCTCGGCCACCCCGAGTGGCTGGAGGACCCCCGCTTCGCGCGCTCCCCGGAGCGGCGGAAGAACCGCTTCGCGCTCGAGAAGGAGATCACCGCGGTGCTGGCGACCGCGCCCACCGCGCACTGGACCAAGGTCCTCGACGACGCGGGCGTGCCGTGCGGGCCCGTCTACAACTACGAGCAGATGTTCGCCGACCCTCAGGTCAAGCACCGCGAGATGGTCGTGCACGCGGAGGACGCCGAGCTGGGTCGCGTGCCCCATATCCGTACCCCGGTGCGGCTGTCGGCCAGTGACGTGGCGGTGCGGCGGACCGCGCCCCGGCTCGGCCAGCACACCGACGAGATCCTGGCCGGCCTCGGCTACGCGCCGGCGGACGTCCAGAGCCTGCGCGGCGAGAGCGTGATCTGA
PROTEIN sequence
Length: 399
MADRNPRGPLDGVKVLDMTEHMAGPFCTMILADMGADVIKLERPGAGDSSRGMGDGSERNPYFRYINRNKKSLTLDYKGARGREIFLKLIPSMDVLVENYRPTVMDRAGLGWETLNRLNPRLIYAQLSGFGSDGPYREKGGFDLIAQGMGGIMHVTGEPDGPPTSVGLPICDLGTGMWGAQGVLAALYERQRTGRGQKVECSLLETAVGFSSWTSAGWLADHVEPVRMGSRHRQNAPYQRFETKDGYMMIGAGGQSIWQRCARALGHPEWLEDPRFARSPERRKNRFALEKEITAVLATAPTAHWTKVLDDAGVPCGPVYNYEQMFADPQVKHREMVVHAEDAELGRVPHIRTPVRLSASDVAVRRTAPRLGQHTDEILAGLGYAPADVQSLRGESVI*