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PLM1_100_coex_sep16_scaffold_258

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_258_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..462)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8W2_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM89872.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM1_100_coex_sep16_scaffold_258_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(526..1794)
DNA (1269bp) protein (423aa)
Beta-lactamase Tax=Pusillimonas sp. (strain T7-7) RepID=F4GP25_PUSST
Beta-lactamase {ECO:0000313|EMBL:KJB93805.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
beta-lactamase
PLM1_100_coex_sep16_scaffold_258_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1810..3330)
DNA (1521bp) protein (507aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08073.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
PLM1_100_coex_sep16_scaffold_258_4
Lepisosteus oculatus, Lepisosteus, Semionotiformes, Neopterygii, Chordata, Metazoa

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comp(3353..4408)
DNA (1056bp) protein (352aa)
PREDICTED: phosphotriesterase-related protein isoform X1 Tax=Sorex araneus RepID=UPI0003319473
Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000012828}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.;" source="Lepisosteus oculatus (Spotted gar).;"
aryldialkylphosphatase
PLM1_100_coex_sep16_scaffold_258_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4426..5592)
DNA (1167bp) protein (389aa)
Beta-lactamase bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_258_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5711..6967)
DNA (1257bp) protein (419aa)
id=2971014 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_258_7
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7028..8287)
DNA (1260bp) protein (420aa)
Possible type I phosphodiesterase Tax=Planctomyces maris DSM 8797 RepID=A6CFW3_9PLAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY74768.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM1_100_coex_sep16_scaffold_258_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8537..9520)
DNA (984bp) protein (328aa)
HMGL-like protein bin=GWA2_Methylomirabilis_73_35 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-hydroxy-2-ketovalerate aldolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_258_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9517..10713)
DNA (1197bp) protein (399aa)
CAIB/BAIF CoA-transferase, family III Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C393_HYPNA
L-carnitine dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM1_100_coex_sep16_scaffold_258_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10790..11341
DNA (552bp) protein (184aa)
hypothetical protein Tax=Rhizobium phaseoli RepID=UPI0002F39347
Uncharacterized protein {ECO:0000313|EMBL:EGE57396.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_258_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11345..12160
DNA (816bp) protein (272aa)
alpha/beta fold family hydrolase bin=GWC2_Methylomirabilis_70_16 species=Rhodococcus sp. EsD8 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_258_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12165..13292
DNA (1128bp) protein (376aa)
Phospholipase/Carboxylesterase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRZ1_PARL1
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABS62674.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM1_100_coex_sep16_scaffold_258_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13258..14760)
DNA (1503bp) protein (501aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_24 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amidohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_258_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14771..15106)
DNA (336bp) protein (112aa)
Fructose-2,6-bisphosphatase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMR5_9BURK
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_258_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15391..16587)
DNA (1197bp) protein (399aa)
L-carnitine dehydratase/bile acid-inducible protein F bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acyl-CoA transferase/carnitine dehydratase
Tax=CSP1_6_Rokubacteria
Displaying 15 items

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