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PLM1_100_coex_sep16_scaffold_60_6

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(4650..6026)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8) similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 456.0
  • Bit_score: 295
  • Evalue 1.50e-77
ErfK/YbiS/YcfS/YnhG family protein Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 456.0
  • Bit_score: 330
  • Evalue 1.90e-87
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 456.0
  • Bit_score: 330
  • Evalue 2.60e-87

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1377
GTGCGCTATCACTTCTCCGGCATCGCGGGCGCCGGCATGAACCCGCTGGCCCGGCTCATGCGAGCCCGCGGCCACGCCGTGCAGGGCTCCGACCGCTCCTTCGACCAGGGCAAGAACGCGGAGGTGGCCGCCCGCCTGGCCGCGCTCGGCATCGTCGTCAAGCCCCAGGACGGCTCCGCGGTGACCACGGACCTGGACCGCTTCGTCTACTCCACCGCGGTGGAGGCGGAGACGCCGGAGGTGCGCGCCGCGCGCACGCTCGGGCTCGAGCGGGTCCCGCGCCCGGCGCTGCTGGCCGAGGTGGTGGATGCCGGGCGGCCGGGCGTCGCGATCGCGGGCACCAGCGGCAAGAGCACGATCACCGGCATGGTGGGCTGGCTCACCCGCGAGGCCGGAGTGGCCGCCACCGTGCTGGGCGGCGCCGCGCTCGCGGGCGAGGGCGCGAGCGGCTGCTTCCTGCCGGGCCCGGTGGACGGGCCGGTGGCCGCGGAAGCCTGCGAGTCCGATGGCACGCTGACCGGTTACCACGCCGCGCTCGGGCTCATCCACAATATCAGCCGCGATCACGGCGAGGTGGACGCGCTGCGGCCCCAGTTCGAGGCCTTCGCCAAGCGCTCCGGCCGGCTCCTGGTCAATAGCGCTTCGCCCGAGGCCGCCCGGGTGGGCCGGGCGGTGGGCGCGCACAGCTACGGCGCGGGACCGGGCGCCGACACTCCCCTCGCGATCACGAGCACCGGTCCCCATCGCGCGCGCGGGACCCTCCATCTGCCGACGGGGCCGCTCATCCTCGACGTGCCCCAGCCCGGGCTCCACAACCTGGAGAACGCGGCGGCCGCCGCCCTGATCGCGCTCGACCTGGGCATCGCCCCGGCGACGGTGGCGGCGCTGCTCGCCCGCTTCCCGGGCGTGGCGCGCCGGTTCGAGGTGATCGGCGTGACCGCCGAGGGCGTCCGGGTGGTGGACGACTACGCGCACAACGGGGAGAAGCTCCGCGCCGCGATCACCGCGGCCCAGGCCGGGGCGGCGCGCGTCTTGGCCGTCTTCCAGCCGCACGGCTTCGGGCCCGCCCGCTTCCTGCGGCCCGAGCTGCGCGAGCTGATGCCGCGCCTGCTGCGGCCGTCGGACCGCCTCTGCTACGCGGAGATCTACTATGCGGGCGGCTCCGTGGCCAAGGACATCTCGAGCCGCATGCTCGCCGACGACCTGCCGGCCGCCCTGCGCTGCGAGTACGCGCCGAGCCACCGGGCGGTCATCGACTGGATCCGGGCGGAGGCCCGGCCGGGCGACACCGTGCTGATCATGGGCGCCCGGGACCCCGAGCTGCCCGGCCTGGCCCGCGCCGCGTTCGGCGCCCTCCAGGCCCACCCCGCCGCCTAG
PROTEIN sequence
Length: 459
VRYHFSGIAGAGMNPLARLMRARGHAVQGSDRSFDQGKNAEVAARLAALGIVVKPQDGSAVTTDLDRFVYSTAVEAETPEVRAARTLGLERVPRPALLAEVVDAGRPGVAIAGTSGKSTITGMVGWLTREAGVAATVLGGAALAGEGASGCFLPGPVDGPVAAEACESDGTLTGYHAALGLIHNISRDHGEVDALRPQFEAFAKRSGRLLVNSASPEAARVGRAVGAHSYGAGPGADTPLAITSTGPHRARGTLHLPTGPLILDVPQPGLHNLENAAAAALIALDLGIAPATVAALLARFPGVARRFEVIGVTAEGVRVVDDYAHNGEKLRAAITAAQAGAARVLAVFQPHGFGPARFLRPELRELMPRLLRPSDRLCYAEIYYAGGSVAKDISSRMLADDLPAALRCEYAPSHRAVIDWIRAEARPGDTVLIMGARDPELPGLARAAFGALQAHPAA*