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PLM1_100_coex_sep16_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_60_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3..743
DNA (741bp) protein (247aa)
2-nitropropane dioxygenase NPD bin=GWF2_Methylomirabilis_70_14 species=Caulobacter segnis genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-nitropropane dioxygenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

740..1543
DNA (804bp) protein (268aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Gordonia paraffinivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fabL; short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1562..3394
DNA (1833bp) protein (611aa)
Squalene-hopene cyclase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029U6_SOLUE
squalene-hopene cyclase
Squalene-hopene cyclase {ECO:0000313|EMBL:ABJ82180.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM1_100_coex_sep16_scaffold_60_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3405..3965)
DNA (561bp) protein (187aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000255|HAMAP-Rule:MF_01676}; EC=1.11.1.15 {ECO:0000255|HAMAP-Rule:MF_01676};; Alkylhydroperoxidase AhpD {ECO:0000255|HAMAP-Rule:MF_01676}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Alkyl hydroperoxide reductase AhpD Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=AHPD_ANADE
alkylhydroperoxidase
PLM1_100_coex_sep16_scaffold_60_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3967..4506)
DNA (540bp) protein (180aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Anaeromyxobacter sp. (strain K) RepID=B4UA86_ANASK
Alkyl hydroperoxide reductase protein C {ECO:0000313|EMBL:AKF05369.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
PLM1_100_coex_sep16_scaffold_60_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4650..6026)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
ErfK/YbiS/YcfS/YnhG family protein Tax=Holophaga foetida DSM 6591 RepID=H1P0C4_9BACT bin=16ft_combo_ws3_JS1 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM1_100_coex_sep16_scaffold_60_7

Not on your lists

6180..6896
DNA (717bp) protein (239aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI00036A3220
Uncharacterized protein {ECO:0000313|EMBL:KKL75451.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_60_8
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6898..7362)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000365D99D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL92733.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
PLM1_100_coex_sep16_scaffold_60_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7359..8303)
DNA (945bp) protein (315aa)
N-carbamyl-D-amino acid amidohydrolase bin=GWF2_Methylomirabilis_70_14 species=Thauera sp. 28 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-carbamyl-D-amino acid amidohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8317..8652)
DNA (336bp) protein (112aa)
Thioredoxin bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_60_11
unknown

Not on your lists

8729..8908
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_60_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8896..9816
DNA (921bp) protein (307aa)
putative small-conductance mechanosensitive ion channel; K03442 small conductance mechanosensitive channel bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative small-conductance mechanosensitive ion channel
Tax=CSP1_5_NC10
PLM1_100_coex_sep16_scaffold_60_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9944..10972
DNA (1029bp) protein (343aa)
mreB; Rod shape-determining protein mreB bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
mreB; Rod shape-determining protein mreB
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_60_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11131..12423
DNA (1293bp) protein (431aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TVX9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63448.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_60_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12423..12905
DNA (483bp) protein (161aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_60_16

Not on your lists

12941..14749
DNA (1809bp) protein (603aa)
Putative uncharacterized protein Tax=Chondromyces crocatus RepID=D7P600_CHOCO
Uncharacterized protein {ECO:0000313|EMBL:KKL84509.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_60_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14782..15684
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-hydroxyisobutyrate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_60_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

15772..16239
DNA (468bp) protein (156aa)
ahpC/TSA family protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ahpC/TSA family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM1_100_coex_sep16_scaffold_60_19
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16247..17104
DNA (858bp) protein (286aa)
apt2; hypothetical protein (EC:2.4.2.7)
Apt2 {ECO:0000313|EMBL:ACN16940.1}; EC=2.4.2.7 {ECO:0000313|EMBL:ACN16940.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
Apt2 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QBD8_DESAH
PLM1_100_coex_sep16_scaffold_60_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17136..17804
DNA (669bp) protein (223aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxymethylenebutenolidase (EC:3.1.1.45)
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_60_21
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17860..18846)
DNA (987bp) protein (329aa)
MT-A70 family protein Tax=Acidovorax delafieldii 2AN RepID=C5T1J5_ACIDE
Hypothetical protein
Plasmid pAcX50f, complete sequence {ECO:0000313|EMBL:AJE23807.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
PLM1_100_coex_sep16_scaffold_60_22
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

18982..19500
DNA (519bp) protein (173aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM1_100_coex_sep16_scaffold_60_23
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19575..20747
DNA (1173bp) protein (391aa)
3-carboxy-cis,cis-muconate lactonizing enzyme Tax=Bradyrhizobium sp. YR681 RepID=J3HXM9_9BRAD
3-carboxy-cis,cis-muconate lactonizing enzyme {ECO:0000313|EMBL:EJN08733.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
PLM1_100_coex_sep16_scaffold_60_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(20828..22612)
DNA (1785bp) protein (595aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00037A4F79
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=CSP1_2_Dadabacteria
PLM1_100_coex_sep16_scaffold_60_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22913..23266
DNA (354bp) protein (118aa)
NADH-quinone oxidoreductase subunit A bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nuoA; NADH dehydrogenase I subunit A
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23257..23895
DNA (639bp) protein (213aa)
NADH-quinone oxidoreductase subunit B bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD(P)H-quinone oxidoreductase subunit K
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23945..24352
DNA (408bp) protein (136aa)
NADH-quinone oxidoreductase bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24446..25081
DNA (636bp) protein (212aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_60_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

25229..26389
DNA (1161bp) protein (387aa)
NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_60_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26391..27392
DNA (1002bp) protein (334aa)
NADH-quinone oxidoreductase subunit H bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
respiratory-chain NADH dehydrogenase subunit 1
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 44 in total

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