ggKbase home page

PLM1_100_coex_sep16_scaffold_203_30

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(29974..31791)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 599.0
  • Bit_score: 1008
  • Evalue 2.70e-291
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 622.0
  • Bit_score: 603
  • Evalue 4.30e-170
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 599.0
  • Bit_score: 1008
  • Evalue 3.70e-291

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGGCGGACGAATCAAGGATCGCGGAAGAGCCGAAGATCGAGGAGCTGGACAAGCTCATCGCCAAGGGGAAGCAGAAGGGCTTTCTCACCTACGACGAGGTGAACGACGCCCTCCCCTCCGACCTCGTCACCCTCGATCAGCTCGACGACATCATGCTGCTGTTCGGCTCGATGGACATCGAGCTCGTGGACTCGACCAAGGCGGTGCGCCTGCCGTCCGAGATGGCGGCCCAGGCCGCCGATCCCGAGCCCGACGACGAGGAGCCCGAGCCGCGGCGCATCGATCTGACCCCGGGGCCGGTCGGCCGCACCGAGGATCCGGTTCGTCTCTACCTGCGCGAGATGGGCAAGGTGGCCCTCCTCACCCGCGAGGGCGAGATCACGCTCGCCAAGCGCATCGAGGAAGGCAAGGACGAGGCCACCGCCGCGATCCTCTCCACCAGCCTGGCCGTCGAGAAGATCCGGGCCCTCCGCGAGGAGCTGCGCCAGGACATCATCCCGATCAAGGACGTGGTGGATTTCCCGGAAGAGGAGTCCACCGAGGAGAAGGAAGCGGCGCTGCGCCGCTCGGTGATCCGCGAGCTGGGCAACATGGACCGGCTCCTGCGCGAGCGGGAGCAGCTCACGCACCAGTGGCGACGCCTCAAGGCCAAGACCGGGGGACGGAAGCGAGGCAAGGCCGAGCCGGCGTGGAAACGGGTCGAAGGGCAGGCCGAAGCCAAGAAGAGCAAGGTCCTCTCGATCCTCCGCGGTCTCAACCTCCAGCAGTCCCTCCTCGATCTCTGGGGCAACGATCTCAAGAAGCTGGTCGAGAAGATCCATCGAGCCGAGCGCGAGATCGCGCTCTGGTCGGACGGCAAGCGCCCCGCCCCCACCGCGGTGGACGCGTTCCTCTCCTCGCTGGCCGACGACGATCGCGACGACGGCGACCGCGACCTCTACCAGAAAGCGGCGTCCAAGCATCCCTCGATCAAGGAGCGGCTCGTGTGGGTGGCCCAGCAGAAGATCAAGCGCGCCGAGGAGCTGGCGGACGCCCGGGCCGAGGAGCTCAAGAACATCGTCAAGATCATCAAGCAGGGCGAGGCCAAGGCCGCGCGGGCCAAGAAGGAGATGGTCGAGGCCAACCTGCGGCTCGTGATCTCGATCGCGAAGAAGTATACCAACCGGGGTCTCCAGTTCCTCGACCTGATCCAGGAAGGCAATATCGGCCTGATGAAGGCCGTCGACAAGTTCGAGTACCGCCGCGGTTATAAGTTCTCGACCTACGCCACCTGGTGGATCCGGCAGGCGATCACCCGGGCCATCGCGGACCAGGCCCGCACCATCCGGATCCCGGTGCACATGATCGAGACCATCAACAAGCTCATCCGGACTTCCAGACAGCTTGTTCAAGAGCTGGGGCGCGAGCCCACCCCGGAAGAGATCGCGGTCAAGATGGAAGTGCCGGTGGACAAGGTCCGGAAGGTCCTCAAGATCGCCCAGGAGCCCATCTCGCTCGAGACGCCCATCGGTGAGGAGGAGGACAGCCACCTGGGCGACTTCATCGAGGACAAGCAGGTGGGCTCGCCGGTCGAGAGCATGATCGGCCTCTCCCTGCGGGAGCAGACCAACAAGGTCCTCAACTCGCTGACGCCTCGAGAAGAAAAGGTGCTGCGGCTGCGCTTCGGATTGTCCGATGGCTGCGAGCACACGTTGGAGGAAGTCGGCCAGGACTTCGCGGTCACCCGCGAGCGCATCCGCCAGATCGAGGCCAAGGCCCTGCGCAAGCTGCGGCATCCCTCGCGCTCCAAGAAGCTCCGGAGCTTCCTCGAGTCGTGA
PROTEIN sequence
Length: 606
MADESRIAEEPKIEELDKLIAKGKQKGFLTYDEVNDALPSDLVTLDQLDDIMLLFGSMDIELVDSTKAVRLPSEMAAQAADPEPDDEEPEPRRIDLTPGPVGRTEDPVRLYLREMGKVALLTREGEITLAKRIEEGKDEATAAILSTSLAVEKIRALREELRQDIIPIKDVVDFPEEESTEEKEAALRRSVIRELGNMDRLLREREQLTHQWRRLKAKTGGRKRGKAEPAWKRVEGQAEAKKSKVLSILRGLNLQQSLLDLWGNDLKKLVEKIHRAEREIALWSDGKRPAPTAVDAFLSSLADDDRDDGDRDLYQKAASKHPSIKERLVWVAQQKIKRAEELADARAEELKNIVKIIKQGEAKAARAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIAVKMEVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVGSPVESMIGLSLREQTNKVLNSLTPREEKVLRLRFGLSDGCEHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFLES*