ggKbase home page

PLM1_100_coex_sep16_scaffold_439_9

Organism: PLM1_100_coex_sep16_Rokubacteria_71_20

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 7213..8604

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 456.0
  • Bit_score: 718
  • Evalue 2.50e-204
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 457.0
  • Bit_score: 422
  • Evalue 8.00e-116
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 456.0
  • Bit_score: 718
  • Evalue 3.50e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAGCGAGCGCATCGTCATCGCGGAGGACGACGAGGACCTCGCCTTCGTCCTCCGCGAGGCCCTGCGCCGCCAGCGCTACGAGCCCGAGGTGGCGCCCACCGCGGGCGCCCTCCTCGAGAAGCTCAAGGCGACCGCCTACGACCTGATTCTCCTCGATGTCCGGCTGCCCGACATGGACGGCCTCGACGCCATTCCGAAGTGCCGCGAGCTCGCGCCGGACACGCCCATCATCGTGATGACCGCGCACGGCACGCGCCAGACCGCGATGGACGCGATGACGCGCGGGGCCTACGACTTCTTCACCAAGCCGCTCAAGATGGACGAGTTCCAGGTCGTCGTCTCGCGCGCGCTCGACCGGCGGCGGCTGCAGAAGCAGGTCAAGGTCCTGCGCGAGAGCCAGCCGGGGGGCGTCGAGGGGCTGATCGGGCAGAGCGAGGCGCTCAAGCGGGTGGTGGAGATGGCCCATCGCGCCGCCCCCACCGACCTGACCGTGCTGATCCTGGGCGAGAGCGGCACCGGCAAGGAAGTGCTGGCGCGGGGGATCCACCGACTCAGTTCTCGGAAAGATGGGCCGTTCGTGCCGGTCAACTGCGCGGCCATCCCCGAAGGCCTGCTCGAGTCCGAGCTGTTCGGCCACGAGCGGGGGGCCTTTACCGGCGCGGTGCGGGCGCGGCCCGGCCGCTTCGAGCTCGCCCGGGAGGGCACGCTGTTCCTGGACGAGATCGGCGACATGCCGATGCCCATGCAGGCCAAGATCCTGCGCGTGCTCCAGGAGCGCGAGTTCGAGCGGGTGGGGGGCACCCGCACCATCGCCGCCGACGTGCGGGTGATCGCGGCCACGCACCGGACCCTCGAGGCGGCGGTGGCGCAGGGGACGTTCCGCGAGGACCTGTTCTACCGCCTCCAGGGCGTGGGCATGCACCTGCCCCCGCTGCGCGAGCGCGTGGACGACCTGCCGCTCCTGGCCACCCATCTCCTGGAGCGCGCGGCCAGGCGGCTCAACCGCGCGCCCGCCATCCTCTCGTCCGAGGCCCTGCGCTGCCTGTGGACCTACGCGTGGCCGGGCAACGTGCGCGAGCTGCAGCACGTGCTCGAGGGCGCGATGGTGATGAGCGACGGCGTGATCAACCCCGAGCACCTGCCCCCCGCGATCCAGCGCTCGGCCCAGGCCCGGCCCGCCGCGGAAAGCGGGCCGGTGATGTCGGGCTCGCTCGACGAAGCACTCGAGGAATGGGAGCGCCGCATGATCCTGGACGCGCTCTCGCAGACCCAGGGGGTGCAGGCGCGTGCGGCCAAGATCCTCGGCATCTCGGAGCGCAGCCTCTGGTACCGGATCAAGAAGCTGGGCATCCAGGTGCGCACGCCCGAGGACGGCCCGCCCCCGGCCTGA
PROTEIN sequence
Length: 464
MSERIVIAEDDEDLAFVLREALRRQRYEPEVAPTAGALLEKLKATAYDLILLDVRLPDMDGLDAIPKCRELAPDTPIIVMTAHGTRQTAMDAMTRGAYDFFTKPLKMDEFQVVVSRALDRRRLQKQVKVLRESQPGGVEGLIGQSEALKRVVEMAHRAAPTDLTVLILGESGTGKEVLARGIHRLSSRKDGPFVPVNCAAIPEGLLESELFGHERGAFTGAVRARPGRFELAREGTLFLDEIGDMPMPMQAKILRVLQEREFERVGGTRTIAADVRVIAATHRTLEAAVAQGTFREDLFYRLQGVGMHLPPLRERVDDLPLLATHLLERAARRLNRAPAILSSEALRCLWTYAWPGNVRELQHVLEGAMVMSDGVINPEHLPPAIQRSAQARPAAESGPVMSGSLDEALEEWERRMILDALSQTQGVQARAAKILGISERSLWYRIKKLGIQVRTPEDGPPPA*