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PLM1_100_coex_sep16_scaffold_388

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_388_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..169)
DNA (168bp) protein (56aa)
Enoyl-CoA hydratase/carnithine racemase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
benzoyl-CoA-dihydrodiol lyase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_388_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(251..799)
DNA (549bp) protein (183aa)
Cupin 2 domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_388_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(796..1809)
DNA (1014bp) protein (338aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_388_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1806..4259)
DNA (2454bp) protein (818aa)
4-hydroxybenzoyl-CoA reductase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_388_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4344..4847)
DNA (504bp) protein (168aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_388_6
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4937..5983
DNA (1047bp) protein (349aa)
RmuC domain-containing protein Tax=Burkholderia glumae (strain BGR1) RepID=C5AD70_BURGB
rmuC family protein
RmuC domain-containing protein {ECO:0000313|EMBL:ACR28115.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
PLM1_100_coex_sep16_scaffold_388_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6002..6835
DNA (834bp) protein (278aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_388_8
unknown

Not on your lists

7044..7370
DNA (327bp) protein (109aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_388_9
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7422..8630)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DK65_BRAJP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM1_100_coex_sep16_scaffold_388_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8683..9669)
DNA (987bp) protein (329aa)
ABC-type branched-chain amino acid transport system, permease component Tax=Variovorax sp. CF313 RepID=J3CL28_9BURK
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM1_100_coex_sep16_scaffold_388_11
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9669..10550)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC-type transport system, permease component Tax=Variovorax sp. CF313 RepID=J2K0S8_9BURK
inner-membrane translocator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
PLM1_100_coex_sep16_scaffold_388_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10557..11270)
DNA (714bp) protein (238aa)
ABC transporter related protein Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter-like protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM1_100_coex_sep16_scaffold_388_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11270..12061)
DNA (792bp) protein (264aa)
ABC transporter related Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZA8_RHOP2
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM1_100_coex_sep16_scaffold_388_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12054..12677)
DNA (624bp) protein (208aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_388_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12747..13127
DNA (381bp) protein (127aa)
Fosmidomycin resistance protein bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 15 items

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