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PLM1_100_coex_sep16_scaffold_492

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_492_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..257
DNA (255bp) protein (85aa)
Cell shape-determining protein MreC bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 293 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rod shape-determining protein MreC
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_492_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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257..745
DNA (489bp) protein (163aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Rod shape-determining protein MreD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_492_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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742..2574
DNA (1833bp) protein (611aa)
Cell elongation specific D,D-transpeptidase bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mrdA; penicillin-binding protein 2
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_492_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2734..3825
DNA (1092bp) protein (364aa)
Rod shape-determining protein RodA bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_492_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3874..5415
DNA (1542bp) protein (514aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ribonuclease G
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_492_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5472..5828
DNA (357bp) protein (119aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_492_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5890..6171
DNA (282bp) protein (94aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_492_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6171..8438
DNA (2268bp) protein (756aa)
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_492_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8428..8595
DNA (168bp) protein (56aa)
YHS domain protein bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
YHS domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_492_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8595..9476
DNA (882bp) protein (294aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_492_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9516..10250
DNA (735bp) protein (245aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_492_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10237..11142)
DNA (906bp) protein (302aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_492_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11164..11511
DNA (348bp) protein (116aa)
Hydrogenase maturation factor bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0500_03M05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypE; hydrogenase expression/formation protein HypE
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_492_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11453..12061
DNA (609bp) protein (203aa)
Hydrogenase maturation factor bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0500_03M05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AIR synthase-like protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_492_15
unknown

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12118..12198
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 15 items

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