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PLM1_100_coex_sep16_scaffold_553

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_553_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..2115
DNA (2115bp) protein (705aa)
ctaD; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit I bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2112..2432
DNA (321bp) protein (107aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome C oxidase subunit IV
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_553_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2437..3231
DNA (795bp) protein (265aa)
Putative CtaG protein bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_553_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3300..4616
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4649..5584
DNA (936bp) protein (312aa)
UDP-glucuronate decarboxylase (EC:4.1.1.35)
NAD-dependent epimerase/dehydratase bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_553_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5616..5786
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5867..6862
DNA (996bp) protein (332aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleotidyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6931..8721
DNA (1791bp) protein (597aa)
Elongation factor 4 bin=GWF2_Methylomirabilis_70_14 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein LepA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8726..9499
DNA (774bp) protein (258aa)
Signal peptidase I bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
lepB; signal peptidase I
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_553_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9526..10677
DNA (1152bp) protein (384aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxygen-independent coproporphyrinogen III oxidase (yggW) (EC:1.3.99.22)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_553_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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11582..11989
DNA (408bp) protein (136aa)
Thioesterase superfamily protein bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetic acid degradation-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_553_12
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11979..13325
DNA (1347bp) protein (449aa)
Molybdopterin oxidoreductase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C9D9_STRBB
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ADI10657.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
Displaying 12 items

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