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PLM1_100_coex_sep16_scaffold_582

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_582_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3..932
DNA (930bp) protein (310aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Methylomirabilis_70_24 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transporters inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_582_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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929..2461
DNA (1533bp) protein (511aa)
Oligopeptide ABC transpoter oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_582_3
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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2480..3169
DNA (690bp) protein (230aa)
leucyl-tRNA--protein transferase Tax=Verrucomicrobium sp. 3C RepID=UPI00036328F3
hypothetical protein
Tax=RBG_13_Spirochaetes_68_11_curated
PLM1_100_coex_sep16_scaffold_582_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3212..3919
DNA (708bp) protein (236aa)
Outer membrane lipoprotein carrier protein LolA bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Outer-membrane lipoprotein carrier protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_582_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3935..4432
DNA (498bp) protein (166aa)
hypothetical protein; K09767 hypothetical protein bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
yajQ; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_582_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4479..5798
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO bin=GWF2_Methylomirabilis_70_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MiaB; 2-methylthioadenine synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_582_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5806..6261
DNA (456bp) protein (152aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
phosphatidylglycerophosphatase A
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_582_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6252..7493
DNA (1242bp) protein (414aa)
CinA-like protein bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein cinA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_582_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7490..8224
DNA (735bp) protein (245aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037FB1CA
peptidase C14 caspase catalytic subunit p20
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_582_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8266..8793
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK68_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_582_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8795..9757
DNA (963bp) protein (321aa)
Patatin bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
patatin
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_582_12
unknown

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9754..9993
DNA (240bp) protein (80aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_582_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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10112..10519
DNA (408bp) protein (136aa)
RecA protein bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora paurometabolica genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
recA; DNA strand exchange and recombination protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 13 items

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