ggKbase home page

PLM1_100_coex_sep16_scaffold_853

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_853_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1656)
DNA (1656bp) protein (552aa)
O-antigen polymerase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUE0_PARL1
O-antigen polymerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_853_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1732..2493)
DNA (762bp) protein (254aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5)
Lactoylglutathione lyase and related lyases bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_853_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2506..2991)
DNA (486bp) protein (162aa)
HAD-superfamily hydrolase, subfamily IIA bin=GWA2_Methylomirabilis_73_35 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_853_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3068..4834)
DNA (1767bp) protein (589aa)
Putative Copper resistance protein, copD family bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium oligotrophicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein D family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_853_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4839..5204)
DNA (366bp) protein (122aa)
Putative Copper resistance protein, copC family bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_853_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5201..6232)
DNA (1032bp) protein (344aa)
putative acetyltransferase bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_853_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6229..7110)
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_853_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7178..8431)
DNA (1254bp) protein (418aa)
Amidohydrolase family bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 8 items

View Taxonomy