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PLM1_100_coex_sep16_scaffold_996

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_996_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..668
DNA (666bp) protein (222aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

671..1330
DNA (660bp) protein (220aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1327..1686
DNA (360bp) protein (120aa)
Iojap-like protein bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iojap family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_996_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1759..2124
DNA (366bp) protein (122aa)
transcriptional regulators, TraR/DksA family bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2168..3115
DNA (948bp) protein (316aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3125..3832
DNA (708bp) protein (236aa)
Amidophosphoribosyltransferase, putative bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidophosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_996_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3905..4909
DNA (1005bp) protein (335aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4917..6095
DNA (1179bp) protein (393aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_996_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6101..6874
DNA (774bp) protein (258aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6879..7220
DNA (342bp) protein (114aa)
Preprotein translocase, SecG subunit bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secG; preprotein translocase subunit SecG
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_996_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7223..7675
DNA (453bp) protein (151aa)
Oligopeptide-binding protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 11 items

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