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PLM1_100_coex_sep16_scaffold_2108

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2108_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2..595)
DNA (594bp) protein (198aa)
id=2937131 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_2108_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(579..1388)
DNA (810bp) protein (270aa)
id=2937131 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_2108_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1554..2213)
DNA (660bp) protein (220aa)
Tetratricopeptide TPR_4 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SPY protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2242..2637
DNA (396bp) protein (132aa)
Regulatory protein, FmdB family bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type I antifreeze protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2591..3412)
DNA (822bp) protein (274aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3435..4433)
DNA (999bp) protein (333aa)
Polyprenyl synthetase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ispB; octaprenyl diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2108_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4444..5166)
DNA (723bp) protein (241aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5192..5767)
DNA (576bp) protein (192aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2108_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5882..7471)
DNA (1590bp) protein (530aa)
Methylmalonyl-CoA mutase, N-terminal domain bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA mutase N-terminal domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2108_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7482..9032)
DNA (1551bp) protein (517aa)
Putative propionyl-CoA carboxylase beta chain bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9114..9509
DNA (396bp) protein (132aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2108_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9499..9816
DNA (318bp) protein (106aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2108_13
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9809..10396
DNA (588bp) protein (196aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMW5_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18767.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM1_100_coex_sep16_scaffold_2108_14
unknown

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comp(10401..10826)
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying 14 items

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