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PLM1_100_coex_sep16_scaffold_2370

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2370_1
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
possible HAD superfamily hydrolase Tax=Verrucomicrobium spinosum RepID=UPI0001744B3D
CbbY/CbbZ/GpH/YieH family hydrolase
Tax=CG_Anaero_01
PLM1_100_coex_sep16_scaffold_2370_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(148..1263)
DNA (1116bp) protein (372aa)
L-Alanine-DL-glutamate epimerase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative racemase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2370_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1265..2755)
DNA (1491bp) protein (497aa)
benzoate transporter Tax=Mycobacterium avium RepID=UPI00031E9031
beta subunit of phenylphosphate carboxylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2370_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2755..6060)
DNA (3306bp) protein (1102aa)
TRAP transporter, 4TM/12TM fusion protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter, 4TM/12TM fusion protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2370_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6048..7034)
DNA (987bp) protein (329aa)
TRAP-T family transporter bin=GWF2_Methylomirabilis_70_14 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP-T family transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2370_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7060..7827)
DNA (768bp) protein (256aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2370_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7827..8837)
DNA (1011bp) protein (337aa)
Luciferase-like, subgroup bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2370_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8838..9605)
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase/isomerase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2370_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9602..11041)
DNA (1440bp) protein (480aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2370_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11038..12066)
DNA (1029bp) protein (343aa)
Putative NAD-dependent alcohol dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2370_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12066..12362)
DNA (297bp) protein (99aa)
Putative Histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2370_12
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12320..12574)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CFD81
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM1_100_coex_sep16_scaffold_2370_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12571..13896)
DNA (1326bp) protein (442aa)
Phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2370_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13909..14751)
DNA (843bp) protein (281aa)
Carbon monoxide dehydrogenase subunit G bin=GWA2_Methylomirabilis_73_35 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbon monoxide dehydrogenase subunit G
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2370_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14756..15460)
DNA (705bp) protein (235aa)
GTPase or GTP-binding protein; K06947 bin=bin7_NC10_sister species=Methanopyrus kandleri genus=Methanopyrus taxon_order=Methanopyrales taxon_class=Methanopyri phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
GTPase or GTP-binding protein-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_2370_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15457..16656)
DNA (1200bp) protein (400aa)
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
Aspartate aminotransferase A (AspAT) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2370_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16665..17162)
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pantetheine-phosphate adenylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2370_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17221..17604)
DNA (384bp) protein (128aa)
UvrD/REP helicase bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UvrD/REP helicase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2370_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17610..18824)
DNA (1215bp) protein (405aa)
HNH endonuclease bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HNH endonuclease
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 19 items

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