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PLM1_100_coex_sep16_scaffold_2506

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2506_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..261
DNA (261bp) protein (87aa)
Export ABC transporter permease bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
export ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2506_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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395..784
DNA (390bp) protein (130aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2506_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(763..1704)
DNA (942bp) protein (314aa)
Putative F420-dependent oxidoreductase, Rv1855c family protein bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium phlei genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative F420-dependent oxidoreductase, Rv1855c family
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2506_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1793..2533
DNA (741bp) protein (247aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2506_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2545..3174
DNA (630bp) protein (210aa)
Endonuclease III bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Endonuclease III
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_2506_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3131..4027)
DNA (897bp) protein (299aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
apurinic endonuclease Apn1 (EC:3.1.21.2)
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_2506_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4029..4529)
DNA (501bp) protein (167aa)
Cyclase/dehydrase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclase/dehydrase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2506_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4736..5455
DNA (720bp) protein (240aa)
Putative permease, DMT superfamily bin=GWA2_Methylomirabilis_73_35 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
efflux transporter
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2506_9

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5873..6817
DNA (945bp) protein (315aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein (Fragment) Tax=mine drainage metagenome RepID=T1AXH3_9ZZZZ
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:EQD62177.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS204/IS1001/IS1096/IS1165 transposase
Displaying 9 items

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