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PLM1_100_coex_sep16_scaffold_2782

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_2782_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(110..541)
DNA (432bp) protein (144aa)
id=14626487 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_2782_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(700..1248)
DNA (549bp) protein (183aa)
Acetyl-CoA acetyltransferase-like protein bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thiolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2782_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1506..1811
DNA (306bp) protein (102aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_2782_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1836..2078)
DNA (243bp) protein (81aa)
id=14626485 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2782_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2244..2510)
DNA (267bp) protein (89aa)
7Fe ferredoxin bin=bin7_NC10_sister species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
fdxC; putative ferredoxin
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2782_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2660..3520)
DNA (861bp) protein (287aa)
Putative peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutathione transport system permease GsiD
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2782_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3591..4544)
DNA (954bp) protein (318aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gsiC; glutathione transport system permease GsiC
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_100_coex_sep16_scaffold_2782_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4546..5412)
DNA (867bp) protein (289aa)
ABC transporter substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_2782_9
unknown

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5660..5926
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_2782_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5963..6988)
DNA (1026bp) protein (342aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oligopeptide ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_2782_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6972..7991)
DNA (1020bp) protein (340aa)
gsiA1; glutathione import ATP-binding protein GsiA (EC:3.6.3.-)
Putative ABC transporter bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_2782_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8070..9050)
DNA (981bp) protein (327aa)
Putative glycosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 12 items

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