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PLM1_100_coex_sep16_scaffold_1090

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1090_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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145..1659
DNA (1515bp) protein (505aa)
ABC transporter ATP-binding component Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGH3_AZOL4
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:CBS90984.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM1_100_coex_sep16_scaffold_1090_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1656..2750
DNA (1095bp) protein (365aa)
Putative ABC transporter, permease component Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBK4_AZOL4
Sugar ABC transporter permease {ECO:0000313|EMBL:EWY38377.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
sugar ABC transporter permease
PLM1_100_coex_sep16_scaffold_1090_3
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2747..3721
DNA (975bp) protein (325aa)
Putative ABC-type transport system, permease component Tax=Osedax symbiont Rs2 RepID=S6HMR5_9GAMM
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:EPJ51392.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
putative ABC transporter, permease component
PLM1_100_coex_sep16_scaffold_1090_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3718..4131
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Acetobacter sp. CAG:977 RepID=R5QH72_9PROT
Cytidine deaminase {ECO:0000313|EMBL:EWY38379.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
cytidine deaminase
PLM1_100_coex_sep16_scaffold_1090_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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4128..5477
DNA (1350bp) protein (450aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Thymidine phosphorylase Tax=alpha proteobacterium BAL199 RepID=A8TNW2_9PROT
thymidine phosphorylase
PLM1_100_coex_sep16_scaffold_1090_6
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5451..6446)
DNA (996bp) protein (332aa)
Adenylate cyclase Tax=Fulvivirga imtechensis AK7 RepID=L8JX79_9BACT
cya2; adenylyl cyclase class-3/4/guanylyl cyclase
Adenylate cyclase {ECO:0000313|EMBL:ELR72778.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
PLM1_100_coex_sep16_scaffold_1090_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6526..7155)
DNA (630bp) protein (210aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Uracil phosphoribosyltransferase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKZ8_HALO1
PLM1_100_coex_sep16_scaffold_1090_8
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7210..9723)
DNA (2514bp) protein (838aa)
GTP cyclohydrolase II {ECO:0000313|EMBL:ABG92094.1}; EC=3.5.4.25 {ECO:0000313|EMBL:ABG92094.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
GTP cyclohydrolase II Tax=Rhodococcus RepID=Q0SK42_RHOSR
hypothetical protein
PLM1_100_coex_sep16_scaffold_1090_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(9734..10354)
DNA (621bp) protein (207aa)
Glucose-1-phosphate uridylyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UTP-glucose-1-phosphate uridylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1090_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(10644..11078)
DNA (435bp) protein (145aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1090_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(11075..12244)
DNA (1170bp) protein (390aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1090_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(12241..13227)
DNA (987bp) protein (329aa)
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1090_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13272..13886)
DNA (615bp) protein (205aa)
LmbE family protein bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1090_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13887..14618)
DNA (732bp) protein (244aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1090_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14629..15672)
DNA (1044bp) protein (348aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 15 items

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