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PLM1_100_coex_sep16_scaffold_1148

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1148_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..635
DNA (633bp) protein (211aa)
Signal recognition particle protein bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
signal recognition particle-like (SRP) component
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1148_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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640..888
DNA (249bp) protein (83aa)
30S ribosomal protein S16 bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsP; 30S ribosomal protein S16
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1148_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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951..1403
DNA (453bp) protein (151aa)
16S rRNA-processing protein RimM bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1148_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1415..1987
DNA (573bp) protein (191aa)
tRNA (Guanine-N1)-methyltransferase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (guanine-N1)-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1148_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2133..2516
DNA (384bp) protein (128aa)
50S ribosomal protein L19 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplS; 50S ribosomal protein L19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1148_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2535..3176
DNA (642bp) protein (214aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1148_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3230..3604
DNA (375bp) protein (125aa)
UPF0102 protein STH1475 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1148_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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3655..4554
DNA (900bp) protein (300aa)
Phenazine biosynthesis protein PhzF family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9F9_SPHTD
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ACZ40452.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_coex_sep16_scaffold_1148_9
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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4572..5618
DNA (1047bp) protein (349aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A bin=GWA2_Methylomirabilis_73_35 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Zixibacteria_53_22_curated
PLM1_100_coex_sep16_scaffold_1148_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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5720..6580
DNA (861bp) protein (287aa)
gctA; glutaconate CoA transferase subunit A (EC:2.8.3.12)
Glutaconate CoA-transferase, subunit A Tax=Saccharopolyspora erythraea RepID=A4FJB8_SACEN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_coex_sep16_scaffold_1148_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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6577..7347
DNA (771bp) protein (257aa)
Coenzyme A transferase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVF5_ACIC1
coenzyme A transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_coex_sep16_scaffold_1148_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..8293
DNA (942bp) protein (314aa)
hypothetical protein Tax=Xanthobacteraceae RepID=UPI000370A913
luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_coex_sep16_scaffold_1148_13
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8370..8717
DNA (348bp) protein (116aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
Putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) RepID=A8N5Y4_COPC7
Displaying 13 items

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