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PLM1_100_coex_sep16_scaffold_1222

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1222_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1143)
DNA (1143bp) protein (381aa)
C4-dicarboxylate ABC transporter Tax=Bradyrhizobium japonicum RepID=UPI00035F3C54
C4-dicarboxylate ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_coex_sep16_scaffold_1222_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1140..1460)
DNA (321bp) protein (107aa)
Putative membrane protein bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP-type mannitol/chloroaromatic compound transport system, small permease component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_coex_sep16_scaffold_1222_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1844..2986)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate transporter substrate-binding protein DctP subunit
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1222_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3135..3776)
DNA (642bp) protein (214aa)
serine protease (EC:3.4.21.-)
Protease Do bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1222_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3773..4405)
DNA (633bp) protein (211aa)
lon3; ATP-dependent protease La; K07157 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptidase S16
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1222_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(4417..5538)
DNA (1122bp) protein (374aa)
Mrp bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1222_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5671..6102
DNA (432bp) protein (144aa)
flavin reductase domain-containing protein bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
flavin reductase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1222_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6105..7187
DNA (1083bp) protein (361aa)
DegT/DnrJ/EryC1/StrS aminotransferase bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1222_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7187..8308
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1222_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8305..9915
DNA (1611bp) protein (537aa)
Lipid A export ATP-binding/permease protein MsbA bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phospholipid-lipopolysaccharide ABC transporter
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 10 items

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