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PLM1_100_coex_sep16_scaffold_1247

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1247_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1247_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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141..614
DNA (474bp) protein (158aa)
outer membrane chaperone skp (omph); K06142 outer membrane protein bin=bin7_NC10_sister species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
outer membrane chaperone Skp
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1247_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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620..1684
DNA (1065bp) protein (355aa)
UDP-3-O-acylglucosamine N-acyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1247_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1677..2510
DNA (834bp) protein (278aa)
lpxA; putative acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-3-O-acylglucosamine N-acyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1247_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2510..3514
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1247_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3522..4328
DNA (807bp) protein (269aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1247_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4321..5535
DNA (1215bp) protein (405aa)
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1247_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5532..6188
DNA (657bp) protein (219aa)
hypothetical protein; K09778 hypothetical protein bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1247_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6188..6823
DNA (636bp) protein (212aa)
waaA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.4.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 9 items

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