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PLM1_100_coex_sep16_scaffold_1400

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1400_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..487
DNA (486bp) protein (162aa)
Putative dehydrogenase Tax=Rivularia sp. PCC 7116 RepID=K9RHT7_9CYAN
putative dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM1_100_coex_sep16_scaffold_1400_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487..1776
DNA (1290bp) protein (430aa)
Phospholipase D/Transphosphatidylase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJZ2_THIDA
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:AAZ97004.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
PLM1_100_coex_sep16_scaffold_1400_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1818..2075)
DNA (258bp) protein (86aa)
hypothetical protein bin=CNBR_ACIDO species=Sphingobium sp. YL23 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM1_100_coex_sep16_scaffold_1400_4
unknown

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comp(2167..2355)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1400_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2712..4361)
DNA (1650bp) protein (550aa)
Radical SAM domain protein bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1400_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4438..5205
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
putative short chain dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1400_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5359..6075
DNA (717bp) protein (239aa)
Spermidine synthase bin=GWA2_Methylomirabilis_73_35 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1400_8
unknown

Not on your lists

6140..6286
DNA (147bp) protein (49aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1400_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6293..6400)
DNA (108bp) protein (36aa)
Amidase bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 9 items

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