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PLM1_100_coex_sep16_scaffold_1624

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1624_1
unknown

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3..515
DNA (513bp) protein (171aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1624_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(519..1223)
DNA (705bp) protein (235aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1220..2005)
DNA (786bp) protein (262aa)
Deoxyribonuclease bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TatD-related deoxyribonuclease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2019..3371)
DNA (1353bp) protein (451aa)
Peptidase U62 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1624_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3368..4816)
DNA (1449bp) protein (483aa)
Putative peptidase TldD bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tldD; peptidase TldD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4987..5787)
DNA (801bp) protein (267aa)
Periplasmic binding protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type transporter, periplasmic subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_7
unknown

Not on your lists

5859..6248
DNA (390bp) protein (130aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1624_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6437..7582
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA11_PHEZH
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ACG79515.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM1_100_coex_sep16_scaffold_1624_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7612..8826
DNA (1215bp) protein (405aa)
Phosphoesterase, PA-phosphatase related protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CZ6_POLSJ
PA-phosphatase-like protein phosphoesterase
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABE43596.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM1_100_coex_sep16_scaffold_1624_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8862..10190)
DNA (1329bp) protein (443aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10223..11095
DNA (873bp) protein (291aa)
Two-component hybrid sensor and regulator bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_12
unknown

Not on your lists

11248..11775
DNA (528bp) protein (176aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1624_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11694..12476)
DNA (783bp) protein (261aa)
Thiazole synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiazole synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12479..12685)
DNA (207bp) protein (69aa)
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein bin=bin7_NC10_sister species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sulfur carrier protein ThiS
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1624_15
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(12796..13593)
DNA (798bp) protein (266aa)
hypothetical protein, partial Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B13E
putative nucleic acid-binding protein, contains PIN domain
Tax=RBG_13_OP8X_37_8_curated
PLM1_100_coex_sep16_scaffold_1624_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13942..15009)
DNA (1068bp) protein (356aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 16 items

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