ggKbase home page

PLM1_100_coex_sep16_scaffold_1840

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1840_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..782)
DNA (780bp) protein (260aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase bin=GWC2_Methylomirabilis_70_16 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1840_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(779..1471)
DNA (693bp) protein (231aa)
hypothetical protein; K06997 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alanine racemase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1840_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1501..2253)
DNA (753bp) protein (251aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1840_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2496..3662)
DNA (1167bp) protein (389aa)
Cell division protein FtsZ bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein FtsZ
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1840_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3790..5037)
DNA (1248bp) protein (416aa)
Cell division protein ftsA bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cell division protein FtsA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1840_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5034..5501)
DNA (468bp) protein (156aa)
Polypeptide-transport-associated domain protein FtsQ-type bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polypeptide-transport-associated domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1840_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5717..6595)
DNA (879bp) protein (293aa)
UDP-N-acetylenolpyruvoylglucosamine reductase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1840_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6589..7989)
DNA (1401bp) protein (467aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_1840_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7982..8716)
DNA (735bp) protein (245aa)
stage V sporulation protein E; K03588 cell division protein FtsW bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cell division protein FtsW
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 9 items

View Taxonomy