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PLM1_100_coex_sep16_scaffold_1977

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1977_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..1000
DNA (999bp) protein (333aa)
Tetratricopeptide repeat family protein bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1977_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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975..1748
DNA (774bp) protein (258aa)
id=14627047 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_1977_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1764..2681
DNA (918bp) protein (306aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1977_trna_1
unknown

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2701..2772
DNA (72bp)
transferRNA Gln
PLM1_100_coex_sep16_scaffold_1977_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2795..3493
DNA (699bp) protein (233aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1977_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3509..4216
DNA (708bp) protein (236aa)
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rplY; 50S ribosomal protein L25 (General stress protein CTC)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1977_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4229..4768
DNA (540bp) protein (180aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_1977_7
unknown

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4870..4968
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1977_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5114..7405
DNA (2292bp) protein (764aa)
MutS2 protein bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
mismatch repair ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1977_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7405..8118
DNA (714bp) protein (238aa)
DNA primase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 10 items

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