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PLM1_100_coex_sep16_scaffold_3264

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_3264_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3..752)
DNA (750bp) protein (250aa)
Radical SAM domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_3264_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(774..2381)
DNA (1608bp) protein (536aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-amino-4-deoxy-L-arabinose transferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_3264_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2489..2860)
DNA (372bp) protein (124aa)
Membrane protein, putative bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3264_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2857..3270)
DNA (414bp) protein (138aa)
id=3870377 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3264_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3267..4010)
DNA (744bp) protein (248aa)
ABC-type antimicrobial peptide transport system, ATPase component bin=GWA2_Methylomirabilis_73_35 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antimicrobial peptide ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3264_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3992..4978)
DNA (987bp) protein (329aa)
Putative ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3264_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5166..6437)
DNA (1272bp) protein (424aa)
Flavin-dependent dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
monooxygenase FAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3264_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6434..7465)
DNA (1032bp) protein (344aa)
cell wall biogenesis glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase involved in cell wall biogenesis bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 8 items

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