ggKbase home page

PLM1_100_coex_sep16_scaffold_3453

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_3453_1
unknown

Not on your lists

2..100
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_3453_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

415..1281
DNA (867bp) protein (289aa)
Membrane protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3453_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1288..1800)
DNA (513bp) protein (171aa)
Putative sensor histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cyclic nucleotide-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_3453_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1824..2123)
DNA (300bp) protein (100aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3453_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2237..2986)
DNA (750bp) protein (250aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
permease of the drug/metabolite transporter (DMT) family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3453_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3944..4399
DNA (456bp) protein (152aa)
GTP-binding protein YchF bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein YchF
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_3453_7
unknown

Not on your lists

4501..4590
DNA (90bp) protein (30aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PLM1_100_coex_sep16_scaffold_3453_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4587..5621)
DNA (1035bp) protein (345aa)
Uroporphyrinogen decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase (URO-D)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3453_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5663..6874)
DNA (1212bp) protein (404aa)
MaoC-like dehydratase bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydratase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3453_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6871..7965)
DNA (1095bp) protein (365aa)
ferredoxin bin=bin7_NC10_sister species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
metal-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

View Taxonomy