ggKbase home page

PLM1_100_coex_sep16_scaffold_3595

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_3595_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..1745)
DNA (1743bp) protein (581aa)
Uncharacterized conserved protein UCP016719 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase, putative
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_3595_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1762..2667
DNA (906bp) protein (302aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_3595_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2673..3143
DNA (471bp) protein (157aa)
id=4956250 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_coex_sep16_scaffold_3595_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3093..3386)
DNA (294bp) protein (98aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_3595_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3492..3920
DNA (429bp) protein (143aa)
major facilitator transporter bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3595_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3917..4558
DNA (642bp) protein (214aa)
Major facilitator superfamily MFS_1 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily transporter
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_3595_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4551..6839)
DNA (2289bp) protein (763aa)
General secretion pathway protein E, contains GAF domain bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspE2; general secretion pathway protein E
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 7 items

View Taxonomy