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PLM1_100_coex_sep16_scaffold_3610

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_3610_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..1041)
DNA (1041bp) protein (347aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3610_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1067..1564)
DNA (498bp) protein (166aa)
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_3610_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1564..2022)
DNA (459bp) protein (153aa)
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3610_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2013..2363)
DNA (351bp) protein (117aa)
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3610_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2363..3340)
DNA (978bp) protein (326aa)
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_3610_6
unknown

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comp(3434..3838)
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 6 items

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