ggKbase home page

PLM1_100_coex_sep16_scaffold_487_2

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(325..1242)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 304.0
  • Bit_score: 396
  • Evalue 2.40e-107
tRNA pseudouridine synthase b similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 291.0
  • Bit_score: 248
  • Evalue 2.30e-63
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 304.0
  • Bit_score: 396
  • Evalue 3.40e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 918
GTGATCGAGGCCGGCGTGCTCGTCGTCGACAAGACCGCCGGCGTGACGTCGTTCGACGCGGTGGCGCTCGTGCGCCGCCGGCTCGGTCTCAAGCGCGTGGGCCATGCCGGCACGCTCGATCCCGACGCCACCGGCGTCCTGCCGATGCTGCTCGGCGAGGCGACGAAGCTGATGGCGTACCTCGCCGAGCAGGACAAGGAGTATGTCGCGACCCTGCGCCTGGGCCTGACGACCGACACCGGCGACCTGAGCGGGCGCGTGGTGGCCGAGGCCCCGGTGCGGGGCGTGGATCGGGCGCGCGTGGAGGAGGCCTGCCGGCCCTTCCTCGGCCGGATCAAGCAAGTGCCACCGATGTTCTCGGCGGTGCACCACGGCGGCCGCCGCCTGTACGAGTTGGCGCGCGAGGGGCTGGAGGTCGTGCGCGAGCCGCGGGAGGTGGTGATCCACGCGATCGACGTGCAGGAGGTCTCGGTCCCGCAGATCCGGCTCCGGGTGGTCTGTGGCAAGGGGACCTACCTGCGTGCGCTGGCCGCCGACCTCGGCGCCGCGCTGGGGTGCGGGGCGGCGGTCGAGCGCCTGGCGCGCACGCGGGTCGGGCCCTTCGCACTTGCCGAGGCGCTGTCGTGGGAGGCGCTCGTGGCCGAGCCCCCCGCGACGCTGTGGGCTCGTGTCCAGCCCGCGGAAGCAGCACTGCGCGACTGGCCGGTGCTCCGGCTCGATGCCCGCGCCATGAGCCGGTTCGAGCACGGACAGTCCGTCGAGATCGCTCCGGCACGGTCGGCCGCGGGGGCGTTCGTGCGGGTCCACGCCGCCGACGGCCGGCTCGTCGGCGTGGGGGAGGTCCTCGACGGCGGGCGGACGCGCCCGGTGCGAGTGCTCCATGCGGATCGTCCGGGGACTCGACTCCGCCCCGCCTGA
PROTEIN sequence
Length: 306
VIEAGVLVVDKTAGVTSFDAVALVRRRLGLKRVGHAGTLDPDATGVLPMLLGEATKLMAYLAEQDKEYVATLRLGLTTDTGDLSGRVVAEAPVRGVDRARVEEACRPFLGRIKQVPPMFSAVHHGGRRLYELAREGLEVVREPREVVIHAIDVQEVSVPQIRLRVVCGKGTYLRALAADLGAALGCGAAVERLARTRVGPFALAEALSWEALVAEPPATLWARVQPAEAALRDWPVLRLDARAMSRFEHGQSVEIAPARSAAGAFVRVHAADGRLVGVGEVLDGGRTRPVRVLHADRPGTRLRPA*