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PLM1_100_coex_sep16_scaffold_1046_5

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2339..4258)

Top 3 Functional Annotations

Value Algorithm Source
shc; squalene-hopene cyclase (EC:5.4.99.17) similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 643.0
  • Bit_score: 654
  • Evalue 2.90e-185
Squalene-hopene cyclase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 543.0
  • Bit_score: 945
  • Evalue 1.70e-272
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 635.0
  • Bit_score: 1073
  • Evalue 0.0

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1920
ATGTTACCATTTGCGCTCGTGACGGCCCTCCAGGACGCCATTTGTCGCGCCCAGGACAACTTGCTCTCGATCCAGGCGCCCGACGGGCACTGGATCGGCGAGCTGGAGGCCGACCGCGCGCTCACCGCCGAGTACCTGCTGCTCTGCCACCTGATCGACCGGGTCGACCGCAACGTCGAGCAGCGCGCGGTGCGCTACTTCCGCCGCCGCCAGAGCGCCGACGGCGGCTGGAGCCTCTTCGAGGGCGGCCCCTCCGACCTGTCGGCCACCATCAAGATCTACTTCGCGATGAAGATGGCCGGCGTCGCGATCGTCGACTCCGCCATGCTGGCGGCCCGGGAGCGGATCCACGCCATGGGCGGGCCGGCCAAGGCCAACGTGTTCGCCAAGATCCAGCTGGCGCTGTTCGGCGAGTACGACTGGAACGGCGTGCCGACCATGCCGGCCGAGATCATGCTGCTGCCCCCGCCGTTCTTCCTGTTCAACATCTACGAGGTCTCCTACTGGTCGCGCTGCGTGATCGTGCCGCTGCTGATCATCATGGACCGCAAGCCGATCAAGTGGCTGCCGCCGCATCAGTCGCTCGACGAGCTGTGGCCGACCCCGCGCGAGCAGACGAGCCTGCGCTTCCCGCGCGTGCCGGAGCCGTTCTCGTGGCGGGGCCTGTTCTGGAAGAGCTTCTTCATCGCCGTCGACGACGGGCTGAAGATCTGGGAGCGCTTCTCGCCGCGGCCGCTGCGCAAGCGCGCGATCGAGGCAGCGCGCCTGTGGCTGGAGGAGCGCCTCGCGGTGCCGGGCGGGCTGGGCGGCATCTATCCCGCCATGGCGAACTCGGTGCTGGCCGTGCGCCTGCTCGGCTACCCCGACGACCATCCGCTCATCCTGGGCCAGCTCAAGGAGATCGAGGCGCTCGCCGTCGAGCACGACGACGAGATCTACCTGCAGCCGTGCCCGTCGCCGGTGTGGGACACCTCGCTGGCGGCCAACGCGCTGATCGAGAGCGACCTGGCCCCAGACCATCCCGCGCTCGTGCGCTCGGTCGAGTGGATGATGGCCAAGCAGGTGGCGCTGCCCGGCGACTGGCAGGTGAAGCGCCCGCACGTGCAGCCCGGCGGCTGGGCGTTCCAGTACGACAACCCGTACTATCCCGACCTCGACGACACCGCGATGGTCCTGATGGCGCTGGAGAAGGTCAAGGGCGTCGACGCCGACCGCACGCAGCTGGCCAAGGAGCGGGGGCTCGGCTGGTTCCTCGGGATGCAGAACCAGGACGGCGGCTGGGCGTCGTTCGACGCCGACAACAACCGCATCTATCTGAATAACATCCCGTTCGCCGACCACGGCGCCCTGCTCGACCCCTCCACCGAGGACCTCACCGGCCGCGGCCTCGAGCTGCTCGGCACGCTCGGCTACGGCCTGGACTTCGAGCCGGCCGACCGCGCGCTCGACTTCATCCGTCACAGCCAGCGCCACGACGGGCCCTGGCACGGCCGCTGGGGGGTGAACTACATCTACGGCACCTGGTCGGTCCTGCGCGGGCTCAAGGCGATCGGGGTCGATCCACGGCACGAGTTCGTGCAGCGGGCGGTGCGCTGGCTCATCCGCCGCCAGAACGCCGACGGCGGCTGGGGCGAGACGTGCGAGAGCTACATCAAGCCGGAGCTGGCCGGGCACGGGGTGTCGATCCCCAGCCAGACCTCGTGGGCGCTGCTGGCCCTCTTCGCCGCCGGCCACACGTCGGGGCCCGCCGTCGACAACGGCATCGCGTACCTGCTGCGCACGCAGCGGCCGGACGGCTCGTGGGAGGACGTGTTCTGGAACGGCACCGGCTTCCCGCGGGTCTTCTATTTGAAGTACCACCTGTACGCCCGCTACTTCCCGCTCTGGGCCCTCGGCGTGTACCGCCGCGCCCATGCATGA
PROTEIN sequence
Length: 640
MLPFALVTALQDAICRAQDNLLSIQAPDGHWIGELEADRALTAEYLLLCHLIDRVDRNVEQRAVRYFRRRQSADGGWSLFEGGPSDLSATIKIYFAMKMAGVAIVDSAMLAARERIHAMGGPAKANVFAKIQLALFGEYDWNGVPTMPAEIMLLPPPFFLFNIYEVSYWSRCVIVPLLIIMDRKPIKWLPPHQSLDELWPTPREQTSLRFPRVPEPFSWRGLFWKSFFIAVDDGLKIWERFSPRPLRKRAIEAARLWLEERLAVPGGLGGIYPAMANSVLAVRLLGYPDDHPLILGQLKEIEALAVEHDDEIYLQPCPSPVWDTSLAANALIESDLAPDHPALVRSVEWMMAKQVALPGDWQVKRPHVQPGGWAFQYDNPYYPDLDDTAMVLMALEKVKGVDADRTQLAKERGLGWFLGMQNQDGGWASFDADNNRIYLNNIPFADHGALLDPSTEDLTGRGLELLGTLGYGLDFEPADRALDFIRHSQRHDGPWHGRWGVNYIYGTWSVLRGLKAIGVDPRHEFVQRAVRWLIRRQNADGGWGETCESYIKPELAGHGVSIPSQTSWALLALFAAGHTSGPAVDNGIAYLLRTQRPDGSWEDVFWNGTGFPRVFYLKYHLYARYFPLWALGVYRRAHA*